Perognathus longimembris pacificus (Pacific pocket mouse): 125367667
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Entry
125367667 CDS
T08928
Symbol
Irx1
Name
(RefSeq) iroquois-class homeodomain protein IRX-1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125367667 (Irx1)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
125367667 (Irx1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
125367667
NCBI-ProteinID:
XP_048224305
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Position
19:1816444..1821728
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AA seq
478 aa
AA seq
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MSFPQLGYPQYLSAAGPGAYGGERPGVLAAAAAAAAAASSGRPGAAELGAGAGAAAVTSV
LGMYAAAGPYAGAPNYSAFLPYAADLSLFSQMGSQYELKDNPGVHPATFAAHTAPAYYPY
GQFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
ARRRLKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESIDIDKIDEHDGDQ
SNEDEEDKAEAPRAPAAPTSVLARDRSSPLAAADLLKPPDSPLGLAKEIPDPGSTRLLSP
GSAATGGLQGAPNSKPKIWSLAETATSPDGAPKASPPPPAGHPGGAHGLQHPAFLPSHGL
YTCHIGKFSNWTNGAFLAQGSLLNMRSFLGVGAPHAAPHGPHLSAPPPAQPPVAVAAAGA
LHVDKASARCSPALPERDLVPTPDSPAQQLKSPFQPVRDNSLAPQEGTPRILAALPSA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccgcagctcggctacccgcagtacctgagcgccgccgggcccggcgcctac
ggcggcgagcgccccggggtgctggccgcggccgccgccgctgcggccgccgcctcctcg
ggccggcccggggcggcggagctgggcgcgggcgcgggcgcggccgccgtcacctcggtg
ctgggcatgtacgccgcggccggcccgtacgcgggcgcgcccaactacagcgccttcctg
ccctacgccgccgacctcagcctcttctcgcagatgggctcacagtacgaactcaaggat
aaccccggggtgcacccggccaccttcgccgcccacacggcgcctgcctactacccctac
ggccagttccaatacggcgaccccgggcgacccaagaacgccacgcgcgagagcaccagc
acgctcaaggcctggctcaacgagcaccgcaagaacccctaccccaccaagggcgagaag
atcatgctggccatcatcaccaagatgaccctcacgcaggtctccacctggttcgctaac
gcgcgccggcgcctcaagaaggagaacaaggtgacgtggggcgcgcgcagcaaggaccag
gaggacggcgccctcttcggcagcgacacggagggcgaccccgagaaggcggaggacgac
gaggagatcgacctggagagcatcgacatcgacaagatcgacgagcacgacggcgatcag
agcaacgaggacgaggaggacaaggcggaggcgccgcgcgcgcccgccgccccgacgagc
gtgctggctcgggaccggagctccccgctggcggcggccgacctgctgaagccgccagac
tcgcccttgggcctggccaaggagatccccgatcccggcagcactcgcctgctcagcccc
ggcagcgccgcgacggggggcctgcagggcgccccgaacagcaagcccaagatctggtcc
ctggccgagaccgccacgagccccgacggcgcgcccaaggcgtcccccccgccgcccgcg
ggccaccccggcggcgcgcacgggctgcagcacccagccttcctgcccagccacggactg
tacacctgccacatcggcaagttctccaactggaccaacggcgcgttcctcgcgcagggg
tcgctgctgaacatgcgctccttcctgggggtgggcgcgccccacgccgcgccccacggc
ccccacctgtcggcaccgccgccggcgcagccgccggtcgccgtggccgccgccggggcg
ctgcacgtcgacaaggcctcagcccggtgcagccctgcccttccagagagagacctggtc
ccgacgcccgattcgccggcccagcagttaaaatcgcccttccagccggtacgcgacaac
tcgctggctccgcaggagggaacgccgcggatcctagccgccctgccgtctgcctga
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