Perognathus longimembris pacificus (Pacific pocket mouse): 125367678
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Entry
125367678 CDS
T08928
Symbol
Gigyf1
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125367678 (Gigyf1)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125367678 (Gigyf1)
Surveillance factors
Other surveillance factors
125367678 (Gigyf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
125367678
NCBI-ProteinID:
XP_048224318
LinkDB
All DBs
Position
1:complement(71062322..71076844)
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AA seq
1043 aa
AA seq
DB search
MAAETLNFGPEWLRALSRGGSVASPPPSPAMPKYKYKLADYRYGREEMLALYVKENKVPE
ELQDKEFSAVLQEEPLQPLALEPLTEEEQRNFSLSVNSVAVLRLMGKGAGPPLATTPRGR
GSTRSRGRGRGDSCFYQRSIEEGEGAFGRNPREIQRSQSWDDRGERRFEKSARRDGARSG
FEEGGAGLRKEHTRSDSENWRSLREEQEEEEEGSWRLGAGPRRDGDRWRSASPDGGPRSA
GWREHGERRRKFDFDLRGERGGCGEEDGRGGGGSSHLRRCRGPDGFDDDKDGLPEWCLDD
EDEEMGTFDASGAFLPLKKGPKESIPEEQELDFQGLEEEEEETSEGLDGEVPEAGGKELT
PLPPPEEKSSSSSPLPTLGPLWAANGAADETVEKELPATEGNDVPLSPGVGSPAGPSGDL
EDEEGLKHLQQEAEKLVASLQDSSLEEEQFTAAMQAQGLRHCTAAPALPLSHGAARKWFY
KDPQGEIQGPFTTQEMAEWFQAGYFSMSLLVKRGCDEGFQPLGEVIKMWGRVPFGPGPSP
PPLLGSMDQERLKKQQELAAATLYQQLQHQHLLQLVGSRQLPQCAPREKAAMGDLTPPQQ
QQLTAFLQQLQALKSPRGGDQNLLPTMSRSLSVPDSGPLWDLHTSVSSPSGGETSLWDIP
INSSTQGPILEQLQLQHKFQERREAELRAKREEEERKRREEKRRQQQQEEQKRRQEEEEL
FRRKQVRQQELLLKLLQQQQAAQAPVPAAPSSPPPPWAGLSKQGLSMKTLLELQLEGERQ
LHKQPMAREALRAQASNHRVQLGGLGTNPLNQWVSEAGPLWGGPDKSGGSGSGGLGLWED
TLKSSGSLARSLGLKNSRSSPSLGDSYSHLSGRPVRKKTEDEEKLLKLLQGIPRPQDGFT
QWCEQMLHTLSAAGSLDVPMAVAILKEVESPYDVHDYIRSCLGDTLEAKEFAKQFLERRA
KQKASQQRQQQQQQQQQWWQRQQQQQRQWHGSLGPQPAGSQPGAEEEAGAESPALVTNHT
MHLNSPTTRHFMDWGEGGFLFLK
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagagacactcaacttcgggcctgagtggctgagggccctttcccgtggtggc
agcgtggcctccccacctccatcccctgccatgcccaagtacaagtacaagctggccgac
taccgctatggacgggaggagatgctggccctctatgtgaaggagaacaaggtccctgag
gagctgcaggacaaggagttttccgctgtgttgcaggaggagccgctgcagcccctcgcc
ctggagcctctgaccgaggaggagcagagaaacttctccctgtcagtgaacagtgtggct
gtgctgaggctgatggggaaaggggccgggccccctctggctactaccccccgtggcagg
ggcagcacacgaagccgaggccgtggccgtggtgacagttgcttttaccaaagaagcatc
gaggaaggcgaaggggcctttggacggaaccccagggagatccagcgaagccagagttgg
gatgacagaggtgagaggcgctttgagaagtcagcacggagggatggagctcgctctggg
tttgaagagggaggggctggcctgaggaaggagcacactcgctcagatagcgagaactgg
cgttcacttcgggaagagcaagaggaggaggaggaaggcagctggagacttggggcagga
cctcggagagatggtgatcgctggcgctctgccagccctgatggtggccctcgctctgct
ggctggcgggaacatggggagcggcgacgcaagtttgattttgatttgcgaggggagaga
ggagggtgtggtgaagaggacgggcggggtgggggaggcagctctcacctccggaggtgc
cgagggccagatggctttgatgacgacaaggatgggctcccagagtggtgtctggacgat
gaggatgaggagatgggcaccttcgatgcctctggggccttcctacctctcaagaagggc
cccaaggagtccattcctgaggagcaagagcttgacttccagggcttggaggaggaagag
gaagagacttcggaaggcctggatggagaggtccctgaggcaggtgggaaggagttgacc
cctctgcctcctccagaggagaagtctagctcctcatccccactgcccaccttgggtccc
ctctgggcagcaaatggggctgctgatgaaactgtggagaaagagctccctgccactgaa
ggaaatgatgttcctcttagtcctggggtgggctcccccgcagggccgtcaggagacctg
gaggatgaggaaggcttgaagcacctgcagcaggaggcagagaagctggtagcatcgctg
caggacagctccctggaggaggagcagttcacagctgccatgcaggcccagggcctgcgc
cactgcacagctgcccctgccctgcccctcagccatggcgctgcccggaagtggttctac
aaggacccccagggggagatccaaggccccttcaccacccaggagatggcggagtggttc
caggccggctacttctccatgtccctgctggtgaagcggggctgtgacgagggcttccag
cccctgggagaggtcatcaagatgtggggccgtgtgccctttggccctggcccctcgccg
cccccgctgttggggagcatggatcaggagcggctgaagaaacagcaggagctggccgcg
gccaccttgtaccagcagctgcagcaccagcacttgcttcagcttgtcggcagccgccag
ctcccgcagtgtgcgccccgagaaaaggcagctatgggggacctgacgccgccgcagcag
cagcagctcaccgccttcctgcagcagctccaggctctcaaatcccccagaggcggggac
cagaacctgctcccgactatgagccgctccttgtcggtgccagattccggccccctctgg
gatttacatacctcagtctcatcaccctccggtggtgagaccagtctttgggacatacca
attaactcttcgactcagggtccaattctagaacaactccagctgcagcataaattccag
gaacgcagagaagcggagctcagggccaagcgggaggaggaggagcgcaagcggcgggag
gagaagcggcgccagcagcagcaggaggagcagaagcggaggcaggaggaggaagagctc
ttccggcgcaagcaggtgcggcagcaggagctgctgctgaagttgctgcagcagcaacag
gcagcgcaggccccggtgcctgcggcgcccagctccccgcctccgccctgggccgggctg
tccaaacagggcctgtccatgaagacgctgctggagctccagctggagggtgagcggcag
ctgcacaaacagcccatggcccgcgaggcactgagggcccaggcctccaaccaccgagtg
caacttgggggcctgggcacgaaccccctgaaccagtgggtatctgaggctggaccactg
tggggtgggcctgacaagagtgggggcagtggcagtggcgggcttgggctctgggaggac
actctgaagagcagcgggagcctggcccgcagcctgggcctgaagaacagccggagcagc
ccatctctcggtgactcgtacagccacctgtcaggtcggcctgtccgcaaaaagacggag
gatgaggagaagctgctgaagctgctgcaggggatccccaggccccaggacggcttcacc
cagtggtgtgagcagatgctgcacacgctgagtgctgcgggcagcctggatgtgcccatg
gccgtggccatcctcaaggaagtggagtccccctacgatgtccacgattatatccgttcc
tgcttgggggatacgctggaagccaaagaatttgccaaacaattcctggagcggagagcc
aagcagaaagccagccagcagcgacaacagcagcagcagcagcagcagcagtggtggcag
cggcagcagcagcagcaacggcagtggcatggatccttgggtccccagcctgcaggctcc
cagccgggagcagaggaggaagcaggggcagagtccccagcacttgttacaaaccacacg
atgcaccttaactcacccaccacgaggcactttatggattggggggaagggggtttcctt
tttttaaagtga
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integrated database retrieval system
