Perognathus longimembris pacificus (Pacific pocket mouse): 125367763
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Entry
125367763 CDS
T08928
Symbol
Drosha
Name
(RefSeq) LOW QUALITY PROTEIN: ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03008
Ribosome biogenesis in eukaryotes
plop05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125367763 (Drosha)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
125367763 (Drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125367763 (Drosha)
03009 Ribosome biogenesis [BR:
plop03009
]
125367763 (Drosha)
03036 Chromosome and associated proteins [BR:
plop03036
]
125367763 (Drosha)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
125367763 (Drosha)
Messenger RNA biogenesis [BR:
plop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
125367763 (Drosha)
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
90S particles
RNase
125367763 (Drosha)
Prokaryotic type
rRNA processing factors
125367763 (Drosha)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
125367763 (Drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
YcaO
Motif
Other DBs
NCBI-GeneID:
125367763
NCBI-ProteinID:
XP_048224415
LinkDB
All DBs
Position
19:complement(17227474..17345424)
Genome browser
AA seq
1375 aa
AA seq
DB search
MMQGSSCHRMSFHPGRGCPRGRGGHGARPSAPAFRPQNLRLLHPQQPPAQYQYEPPSAPS
TTFSNSPASNFLPPRPDFVPFPPPMPPSAQGPXPPCPVRPPFPNHQMRHPFPVPPCFPPM
PPPMPCPNSPAVPGAPPGQGTFPFMVPPPSMPHAPPPPVLPQQVNYPYPPGGYSHHNFPP
PNFSSFQNSPSSFPPSAGNGSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHG
RGERHRSLERRERGRSPDRRRPDSRYRSEYDRGRTPPSRHRSYERSRERERERHRHRDNR
RSPSLERSYKKEYKRSGRSYSLGVAEPAGCTPELPGETIKNTDSWAPASEIANHRSPSRE
KKRARWDEEKDRWSDSQSSGKEKNYTSVKEKEPEETLPDKNEEEEEELLKPVWIRCTHSE
NYYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLES
ASESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCS
AKARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEY
IFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILEL
YDWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEI
ANMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPEVITFPIIVHFGIRP
AQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVT
VELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTH
PSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTP
SRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELD
RFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWL
NYPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLT
LGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEY
AITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWN
DPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQ
AEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEREPDETEDRKK
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaggcagttcatgtcataggatgtcgttccaccccggccggggctgccctcgg
ggaaggggaggacacggagcccgaccctccgcgcccgccttccggccccagaacctgaga
ctgcttcaccctcagcagccgcccgcgcagtatcaatacgaacctccaagcgccccgtcc
accaccttctcgaactctccagcctccaatttcctgcctccgcgaccagactttgtgccc
ttccctccgcccatgcctccttcggcgcagggccccncccccccgtgccccgtcagaccc
cctttccccaaccaccagatgaggcaccccttcccagtgccgccctgcttcccccccatg
ccccctcccatgccttgtcccaacagccccgcggtgcccggggcgcccccggggcagggc
accttccccttcatggtgccccctccttccatgccccacgcgccgcccccgcccgtcctg
ccgcagcaggtgaattacccctaccccccgggggggtactctcaccacaacttcccccct
cccaacttcagtagcttccagaacagccccagttctttcccccccagcgcgggcaacggc
agcagcccccacttcaggcacctgcctccctacccactcccgaaggcgcccagcgagcgc
aggtcccccgagaggctcaagcactacgacgaccaccggcaccgggatcacagtcacggg
cgaggggagaggcatcgctcgctggagcggagggagcgaggccgcagccccgaccgcagg
agacccgacagccgctaccgctccgagtacgatcgcgggcgaacgccgccgtcccggcac
cgcagctacgagcggagcagagagcgggaacgggagagacacaggcaccgggacaaccga
agatcaccatctctggaaaggtcctacaaaaaagagtataagagatctggaaggagttac
agcttaggtgtcgctgaacctgcgggatgcacaccagaattacctggagaaactattaaa
aatacagattcatgggctccagcttcagagattgccaatcatcggtctcccagcagggag
aagaagagagctcgttgggatgaagaaaaagacaggtggagtgacagccagagctctggc
aaagagaagaactatacatccgtcaaggagaaggagccagaggagacgctgcctgacaaa
aacgaggaggaagaagaggaactccttaagcctgtgtggattcgatgcacccattcagaa
aattactactccagcgaccccatggatcaggtgggagattctactgtagttggaacaagt
aggctccgtgacttatatgacaaatttgaggaagaattggggagcagacaagaaaaggcc
aaggctgctcgacctccgtgggaacctccgaagacgaagctagatgaagatttagagagt
gccagtgaatcagaatgtgagtccgacgaggacagcacctgctctagcagctcagactct
gaggtgtttgatgtcatcgcagaaattaagcgtaaaaaagcccaccccgaccgacttcat
gatgaactgtggtacaacgacccaggccagatgaatgatggaccactctgcaaatgcagt
gccaaagcgagacgcacaggaattcggcacagcatttatcctggagaagaggccataaag
ccctgtcgccccatgaccaacaacgctggcagactcttccactaccggatcactgtctcc
cctcctaccaacttcttaactgacaggccaactgttatagaatatgatgatcatgaatat
atttttgaaggattttctatgtttgcacatgcccctctaaccaatattcctctgtgcaaa
gtaattagattcaacatagactataccattcatttcattgaagagatgatgcctgagaat
ttttgtgtgaaagggcttgaactcttttcactgttcctattcagagatattttggaatta
tatgactggaatctgaaaggtcctttgtttgaagacagtcctccatgctgcccaagattt
catttcatgccacgttttgtaagatttcttccagatggaggcaaagaagtgttgtcaatg
caccagattctgctatatctgctacggtgtagcaaagccctggtcccagaagaggagatt
gctaatatgcttcagtgggaggagcttgagtggcagaaatatgcggaagaatgcaaaggc
atgattgtcaccaaccctgggacgaaaccaagctctgtccgcattgatcaactggatcgt
gaacagttcaaccctgaagtgattacttttccgattatcgtccactttgggatacgccct
gcacagttgagttatgcaggagacccacagtaccagaaactatggaagagttatgtgaaa
cttcgccacctcctagcaaacagtcccaaagtcaaacaaactgacaaacagaaactggca
cagagggaggaagcactccaaaaaatccgacagaagaatacaatgagacgagaagtaaca
gtggagctaagtagccaaggattttggaagactggcattcgttctgatgtctgtcagcat
gccatgatgctgcctgttttgacccatcatatccgttaccaccaatgcctgatgcacctg
gacaaattgataggatatacttttcaagatcggtgtctgttacagctggccatgactcat
ccgagtcatcatttaaattttggaatgaacccggatcatgccaggaattctttgtctaac
tgtgggattcggcagcctaaatatggagacagaaaagtccatcacatgcacatgaggaaa
aaaggaattaacaccctaataaatatcatgtcacgccttggccaagacgatccaacccct
tcaaggattaatcacaacgaacggttggagttcctgggtgatgctgtggttgagttcctg
accagtgtccatctgtactatttgtttcctagcctggaggaaggaggattagccacctat
cggactgccattgttcagaatcagcacctcgccatgctggcaaagaaacttgagctggat
cgatttatgctatatgctcatggacctgacctgtgtagagaatcagaccttcgacatgca
atggctaattgttttgaagcactgataggagctgtttacttggagggaagcctggaggaa
gccaagcagttatttggacgcttactctttaatgatccggacctgcgagaagtctggctc
aattatcctctccacccactccagctacaagagccaaatactgatcgacaacttattgaa
acttctccagtcttacagaaacttacagaatttgaagaagcaattggcgtcatttttact
catgttcgacttctggcaagggcattcacgttgagaaccgtgggatttaaccatctgacc
ctaggccacaaccagaggatggagttcctaggtgactccatcatgcagctggtcgccaca
gagtacttattcattcatttcccggatcatcacgaaggccacttaactttgttgcgaagc
tctttggtgaataacagaactcaagccaaagtagcagaagagttgggcatgcaggaatac
gccatcaccaatgacaaaaccaagcggcccgtggccctgcggaccaagacattggcggac
cttttggagtcatttattgcagcattgtacattgataaggacttggaatacgtacatacc
ttcatgaatgtctgtttctttccacgattgaaagagttcattctgaaccaggattggaat
gaccccaaatcccagctgcaacagtgttgcttgacacttagaacagaagggaaagagcca
gacatccccctgtacaagactctgcagacggtggggccctcccacgccagaacgtacacc
gtggctgtttacttcaagggagaaaggatcggctgtgggaaaggacccagtattcagcaa
gcggaaatgggagctgcaatggatgcacttgaaaaatataactttccccagatggcccat
cagaagcggttcattgaacggaaatacagacaagagttaaaagaaatgaggtgggaaaga
gagcaccaggagagagagccagacgagactgaagacagaaagaagtga
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integrated database retrieval system
