Perognathus longimembris pacificus (Pacific pocket mouse): 125367932
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Entry
125367932 CDS
T08928
Symbol
Sptbn4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04517
IgSF CAM signaling
plop04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125367932 (Sptbn4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125367932 (Sptbn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
plop04812
]
125367932 (Sptbn4)
Cytoskeleton proteins [BR:
plop04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125367932 (Sptbn4)
Intermediate filaments
Intermediate filament-binding proteins
125367932 (Sptbn4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
RASSF_helical
Helical_needle
SOS1_NGEF_PH
DUF7854
FlgK_D1
Motif
Other DBs
NCBI-GeneID:
125367932
NCBI-ProteinID:
XP_048224614
LinkDB
All DBs
Position
20:complement(19338498..19393978)
Genome browser
AA seq
2572 aa
AA seq
DB search
MAQVPGELDNMEGLSAPNNNNSAPRWESPDRGWDREPVAASTAAASLFECSRIKALADER
EAVQKKTFTKWVNSHLARVGCHIGDLYTDLRDGFVLTRLLEVLSGEPLPRPTRGRMRIHS
LENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRET
RSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDFGKLTKSNANY
NLQRAFRTAEQHLGLARLLDPEDVNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRIGK
VLDQVLEVGKIIERYEELAAELLAWIHRTVGLISNQKFANSLSGVQQQLQAFTAYCTLEK
PVKFQEKGNLEVLLFSIQSILRACNRRLFVPREGCGIWDVDKAWGQLEKAEHEREAALRA
ELIRQEKLELLAQRFDHKVAMRESWLNENQRLVSQDNFGYELPAVEAAMKKHEAIEADIA
AYEERVQGVAELAQALATEGYYDARRVAAQRDSVLRQWALLTGLVGARRTRLEQNLALQK
VFQEMVYMVDWMEEMQAQLLSRECGQHLVEADDLLQKHGLLEGDIAAQSERVEALNAAAL
RFSQLQGYQPCDPQVICNRVNHVHGCLAELQAQAARRRGELEASRRLWALLQELEEAESW
ARDKERLLEAASGAAAGPAAGGAAGPVAGGAHDLSSTARLLAQHKILQGELGGRRALLQQ
ALRRGEELAAGGGGTDLGPGADPVQLAGLAERAASARRRWQRLEEAAARRERRLQEARAL
HQFGADLDGLLDWLRDAYRLAAAGDFGHDEASSRRLARQHRALTGEVEAHRGPVGSLRRQ
LATLGGASGAGPLVVALQVRVVEAEQLFAEVAEVAALRRQWLRDALAVYRMFGEVHACEL
WIGEKEQWLLAMRVPDSLDDVEVVQHRFESLDQEMNGFMSRVLDVNHTVQELVEGGHPSS
DEVRSCQDHLNSRWNRIVELVEQRKEEVSAVLLVENHVLEVAEVRAQVREKRRAVESAPR
AGGALQWRLSGLEAALQALEPRQAALLEEAALLAERFPAQAARLHQGAQELGTEWGALAS
SAQACGEAVAAAGRLQRFLHDLDAFLDWLVRAQEAAGGSEGPLPSSLEEADALLARHAAL
KEEVGQREEDYTRIVAASEALLAADGAELGPGLALDEWLPHLEVGWHKLLGLWEARREAL
VQAHVYQLFLRDLCQALAVLRNQEVALSSAELPGTVESVEEAIKRHRDFLTTMELNQQKM
QVAVQAAEGLLRQGNIYGEQAQEAVTRLLEKSQENQLRAQQWMQKLYDQLGLQHFLRDCH
ELDGWIHEKMLMARDGTREDSHKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQLIQEKP
ELAASVRKKLGEIRQCWAELESTTQAKARQLFEASKADQLVQSFAELDKKLLHMESQLQD
VDPGGDLATVNSQLKKLQSMQSQVEEWYREVGELQAQTASLPLEPASKELVGERQSAVGE
RLVRLLEPLQERRRLLLASKELHQVAHDLDDELAWVQERLPLAMLTERGDGLQAVQQHIK
KNQSLRREIQAHGPRLEEVLERAGALASLRSPEAEAVRRGQEQLQSAWGGLREAAERRQQ
SLDAAYQVEQYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEE
SIAQLSRQCRALLEMGHPDSEQISRRQSQVDRLYVSLKELGEERRVSLEQQYWLYQLSRQ
VDELEHWIAEKEVVAGSPELGQDFEHVSVLQEKFSEFASETGTAGRERLAAVNQMVDELI
ECGHTAAATMAEWKDGLNEAWAELLELMGTRAQLLAASRELHKFFSDARELQGQIEEKRR
RLPRLTAPPEPRPSASSMQRTLRAFEHDLQLLVSQVRQLQEGAAQLRTVYAGEHAEAIAS
REQEVLQGWKELLAACEDARLHVSSTADALRFHSQARDLLSWMDGIASQIGAADKPRDVS
SVEVLMNYHQGLKTELEARVPELTACQELGRSLLLNKSAMADEIQAQLDKLGSRKEEVSD
KWDRHWEWLQQMLEVHQFAQEAVVADAWLTAQEPLLQSRELGSSVDEVEQLIRRHEAFRK
AAAAWEERFSSLRRLTTIEKLKAEQSKQPPTPLLGRKFFGDPTELAAKAAPLLRPGGYER
GLEPLARRASDTLSAEVRTRVGYVRQELKPERLQPRIDRLPEALGRAEPVSPPAAPSDTV
DTPVSPVTVVEQVRPRPERQESADRAPEELPRRRRPERQESVDQPEEAARRRRSERQESV
EHEAAHSLTLGRYEQMERRRERRERRLERQESSEQETPTRGELVKGKATLADIVEQLQEK
EAGPGLPGAVPSLPQPRELPPGRLPNGLEPPERTPRPDRPRARDRPKPRRRPRPREGGES
GGSRRSRSAPAQGGSAPAPPPPPTHTVQHEGFLLRKRELDANRKSSNRSWVSLYCVLSKG
ELGFYKDAKGPASGGTHGGEPLLSLHKATSEVANDYKKKKHVFKLQTQDGSEYLLQAKDE
EEMNSWLEAVAASVAEHAEIARWGQTLPTTSSTDEGNPKREGGERRASGRRK
NT seq
7719 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggttccaggggaactggacaacatggagggcctgtctgcccccaacaacaat
aactctgcaccccgctgggagagtccagacagaggctgggaccgtgaacccgtggcagcc
tccacagcagctgcttctctctttgagtgctccaggatcaaggccttggcggatgagcgg
gaggctgtgcagaagaaaaccttcaccaagtgggtgaactcgcacctcgcccgcgtgggc
tgccacatcggagacctctataccgacctccgggatggctttgtgctcacgaggctcctg
gaagtgctgtctggggagccactgccgaggcccacgcgaggccgcatgcggatccactcc
ctggagaacgtggacaaggccctgcagttcctcaaggagcagcgggtgcacctggaaaac
gtgggatcgcacgacatcgtggacggaaaccaccggctgaccctggggttggtctggact
atcatcctgcgcttccagattcaagtcatcaaaatcgagaccgaggacaacagagagacc
cgctcagccaaggatgctctgctcctatggtgccagatgaaaacagctggttatccagag
gtgaacatacagaatttcaccaccagctggcgggatggcctggccttcaacgccctcatt
catcggcacaggccagatcttgtggatttcggcaaactcaccaaatccaacgccaactac
aacctgcagagagccttccgcacagctgagcagcacctggggctggcacgtttgctggac
cctgaagatgtgaacatggaagctcctgatgagaagtccatcatcacgtacgtggtgtcg
ttttaccactacttctccaagatgaaggccctggcggtggagggcaagcggattgggaag
gtcctggatcaggtgttggaggtggggaaaatcattgagcgctatgaggagctggcagct
gaattgctggcctggattcatcgcactgtgggtcttatcagcaaccagaagtttgccaac
tccctgagtggggtgcagcagcagcttcaggccttcacggcctactgcacactggaaaaa
cctgtcaagtttcaggagaaggggaatttggaggtgcttctcttcagcatccagagtata
ttgcgtgcttgcaaccgtcgcctctttgttcctcgggagggctgtggcatttgggatgtt
gacaaggcgtggggtcagttggagaaggcagagcatgagcgggaggctgccttgcgggct
gagctgatccggcaggagaagctagaactcctggcccagagatttgaccacaaggtggct
atgagagagagctggctgaatgagaaccagcgcctggtctcccaggacaactttgggtac
gagctgccggccgtggaagccgccatgaagaagcacgaggcaattgaggccgacatcgcc
gcctatgaggagcgggtgcagggcgtggctgaactggctcaggctttggccactgaaggc
tattacgacgcccggcgtgtggcagctcagcgagacagtgtcttgcgccagtgggctctg
ctgactgggctggtgggtgcccggcggacccgcctggagcagaacctggctctgcagaaa
gtcttccaggagatggtctacatggtggactggatggaggagatgcaggctcagctgctg
tcccgggagtgtggacagcacctagtggaggcggacgacctgttacagaagcacggactg
ctggagggggacattgctgcccagagcgagcgggtagaggctctcaatgctgcggccctg
agattctcccagcttcagggctatcagccttgcgacccccaggtcatctgcaaccgcgtg
aaccacgtgcacggctgcctggcggagctgcaggcacaggcggctcgacggcgcggggag
ctggaggcctcgcggaggctgtgggcgctgctgcaggagctggaggaggcggagagctgg
gcccgggacaaggagcggcttctggaggcggcgtcgggggccgcggcggggccggcggcg
gggggcgcggcggggccggtggcggggggcgcgcacgacctgtccagcaccgcacgcctg
ctggcccagcacaagatcctgcagggcgagctgggcgggcggcgggcgctgctgcagcag
gccctgcggaggggcgaggagctggcggccggcggcggcggcaccgatctgggccccggc
gccgaccccgtgcagctggcgggtttggcggagcgcgcggcgagcgcccggcgccgttgg
caacgcctggaagaggcggcggcgcggcgggagcggcggctgcaggaggcgcgggccctg
catcaattcggggccgacctggacggactcctggattggctccgcgacgcttaccgcctg
gcagccgccggggatttcggccacgacgaagcgtccagccggcgcctggcgcgccagcac
cgcgcgctcaccggggaggtggaggcgcaccgcgggcccgtggggagcctgcgacgccag
ctggcgacgctagggggcgcgagcggcgcggggccattggtggtggcgctgcaggtgcgc
gtggtggaggccgagcagctgttcgccgaggtggccgaggtggcggcgctgcggcgccag
tggctgagggacgcgctcgccgtctaccgcatgttcggcgaggtgcacgcttgcgagctg
tggatcggcgagaaggagcagtggctgctggccatgcgcgtgcccgactccctggacgac
gtggaggtggtgcagcaccgattcgagagcctggaccaggagatgaatggtttcatgagc
cgcgtcctggatgtgaaccacacggtccaggagcttgtggaaggaggtcaccccagttca
gatgaggtgcgctcgtgccaggaccacctcaacagcaggtggaaccgcattgtggagttg
gtggagcagcgcaaagaggaggtgagcgcggtgctgctggtggagaaccacgtgctggag
gtggccgaggtgcgcgcccaggtgcgggagaagcgtcgggctgtggagagcgcaccccgg
gccggtggcgccttgcagtggcgccttagtggtttagaggccgctctgcaagcgctggag
ccccgccaggcggccctcctggaggaggcagccctgctggccgagcgcttcccagcgcag
gcggcgcggctgcatcagggagcccaggagctgggtaccgagtggggcgctttggccagc
tcagcacaagcttgcggcgaggcggtggcggcggctgggcgcctgcagcgtttcctgcac
gatctggatgctttcctggactggctggtgcgtgcccaggaggcagcggggggcagcgag
gggcccctgcccagcagcctggaagaggccgatgcgctgctggcgcgccacgctgcgctc
aaggaagaagtgggtcagcgcgaggaggattacacgcgcatcgtggcggccagcgaggca
ctgttggcggctgacggcgccgagctgggcccgggcctggcccttgatgagtggctgcca
cacctggaagttggctggcacaaactgctcggcttgtgggaggcgcgccgggaggcgctg
gttcaggcccacgtctatcagctgtttctgcgagacctgtgccaggcgcttgcggtgctg
cgcaatcaggaggtggcgctgtccagcgcagagctcccaggcaccgtggagtccgtagaa
gaggccataaaaagacacagggattttctcaccaccatggagctgaaccagcaaaagatg
caggtggcggtgcaggctgccgagggcttgctgcggcagggcaacatctatggggagcag
gcccaggaagctgtgacccggctgctggagaagagtcaagaaaaccaattaagagcccag
cagtggatgcagaaactatacgaccagcttggactgcagcacttcctccgagactgccat
gagctggatggctggatccacgaaaaaatgctgatggccagggatggtacacgtgaggac
agccacaagcttcacaagagatggctccggcaccaggcattcatggccgagctggctcag
aataaggagtggctggagaagatcgagagggaaggccagcaactgattcaggagaagccg
gagctggcggcctctgtgcggaagaagctgggtgaaatccggcaatgctgggcggagctg
gagagcaccacccaggccaaggcccggcagctctttgaggccagcaaagcagaccaactc
gtgcagagttttgcagagctggacaagaagctccttcacatggaaagtcagctgcaggat
gtggatcctggtggggacctggccaccgtcaacagccaactcaagaagctgcagtccatg
cagtctcaggtggaagaatggtaccgcgaggtgggagagctgcaggcgcagacggcgtcg
ctgccgctggagccggcaagcaaggagctggtgggcgagcggcagagcgcggtgggcgag
cgcctggtgcggctgctggagccgctgcaggagcgccgccgcctgctgctggcctccaag
gagctccaccaagtggcccacgatctggatgacgagctggcatgggttcaggagaggctg
cctctggccatgctgaccgagcgaggggatggcttgcaggctgtccagcagcacatcaaa
aagaaccagagcctgcgtcgggagatccaggcccacgggccgcgtctggaggaggtgctg
gagcgcgcgggcgccctggcctcgctgcgcagcccagaagccgaggcggtgcgccggggc
caggagcagctgcagagcgcctggggcgggctgcgggaagcggcggagcggaggcagcag
tcgctggacgccgcctaccaagtggagcagtactacttcgacgtggccgaggtggaggcg
tggctgggtgagcaggagctgctcatgatgagtgaggacaagggcaaggatgaacagagc
accctgcagctgctcaagaagcacctgcagctggagcagggcgtggagaactacgaggaa
agcatagcgcagctgtcgcgccagtgccgggcactgctggagatggggcatccggacagt
gaacagataagccggcgtcaatctcaggtggatcgtctgtatgtgtcgctcaaggagctg
ggtgaagagcgccgggtgagcctggagcaacagtactggctataccagctcagccgtcag
gtggacgagctggagcattggatcgcagagaaggaggtagtggctggctcacctgagctc
ggccaggactttgagcatgtctcggtgctgcaggagaaattctcagagttcgccagcgag
acaggcacggcaggcagggagcggctggcagctgtgaaccagatggtggatgagctgatc
gagtgcgggcatacggcagcagccaccatggccgagtggaaagacgggctgaacgaggcc
tgggccgagctgctggagctcatgggcactcgagcccagctgctggctgcctcccgggag
ctacacaagttcttcagcgatgccagagagcttcaagggcagatcgaggagaagcggcgg
cggcttccccgcctgaccgcgccgcctgagccgagacccagtgccagctccatgcagagg
accctgcgagcctttgagcacgacctgcagcttctcgtgtcccaggtacgacagctgcag
gagggggcagcccagttgcgcacagtgtatgcaggcgagcatgcggaggccattgccagc
cgggagcaggaggtgctgcagggttggaaggagctgctggctgcctgcgaggatgcccgg
ctgcacgtgagctccacagccgacgccctgcgcttccacagccaggcccgagacctgctg
tcttggatggacggcattgccagccagatcggagcagctgacaaacccagagacgtgtct
tctgtggaggtgcttatgaactatcaccagggcctgaagacagagctggaagcacgggtg
cccgagctgactgcctgccaggagttggggcgctctctactgctcaacaagagtgccatg
gctgatgagatccaggctcagctagacaagctgggaagcaggaaggaagaggtgtcagac
aagtgggaccgccattgggagtggcttcagcagatgctggaggtgcaccagtttgcccag
gaggcggtggtggctgatgcctggctgacagctcaggagcccctcctgcagagccgggag
ctgggcagcagcgtggacgaggtggagcagctcatccggagacatgaggccttccgcaag
gcagccgcagcctgggaggagaggttcagctctctccggcgcctgaccacgatcgagaaa
ctcaaggcagagcagagcaagcagccacccacccctctgctggggcgcaagttctttggg
gaccccacggaactggcagccaaagcggcccctctgctgcgaccaggaggctacgaaaga
ggcctggagcccctggcccgaagggcctcggacacgctgtcggccgaggtgcggaccagg
gtggggtacgtgcgccaggagctcaaaccggagcgcctgcagccgcgcatcgaccggctg
ccagaggccctgggcagggcggagcccgtgtccccgccagccgcgccttcggatacggtg
gacaccccggtgtcccccgtcacggtagtggagcaggtccggccccggccggagcgccag
gaatctgcagatcgcgcccccgaggagctgccccggaggcggcggcctgagcggcaggag
tcggtggatcaacccgaggaggctgcccggaggcggcggtcggagcggcaggagtcggtg
gagcacgaggcggcgcacagcctgacgctgggccgctacgagcaaatggagaggcggcgg
gagcggcgggagcggcggctggagaggcaggaatccagcgagcaggagacgcccacccga
ggagaactggtcaaggggaaggccaccctagctgacattgtggaacagctgcaggagaaa
gaggcaggcccggggctcccaggtgcagtgccatcgctgccccagcctcgcgagcttccc
cccggccgcctgcctaatggtcttgagccgcccgaacggacacctcggcccgatcggccg
cgggctcgggaccggcccaagccccgacggcggccgaggcccagagagggcggcgagagc
gggggaagccggcgctctcgctccgccccggcccagggaggctccgcccccgcccctccg
cccccgcccactcacacggtgcagcacgagggcttcctgttgcgcaagcgcgagctggac
gccaaccgcaagtcatccaatcggtcgtgggtgagcctctactgtgtgctcagcaagggg
gagctaggcttctacaaggatgccaaaggcccagcctcagggggcacgcatggtggggag
ccactactcagcctgcacaaggccaccagtgaggtggctaatgattacaagaaaaagaag
cacgtcttcaagctccagacccaagatggcagcgagtatttgcttcaggctaaagatgag
gaggagatgaacagttggctggaggctgtggccgcttcagtagccgaacacgctgagatt
gcccgctggggccagacactccccaccacatcgtccacagatgagggcaatcccaaacga
gaaggaggggagcgcagggccagtgggcgcaggaagtga
DBGET
integrated database retrieval system
