Perognathus longimembris pacificus (Pacific pocket mouse): 125367933
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Entry
125367933 CDS
T08928
Symbol
Ltbp4
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
plop04990
]
125367933 (Ltbp4)
Domain-containing proteins not elsewhere classified [BR:
plop04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
125367933 (Ltbp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF_3
EGF
hEGF
FXa_inhibition
EGF_2
Plasmod_Pvs28
EGF_C8A_B_C6
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
125367933
NCBI-ProteinID:
XP_048224615
LinkDB
All DBs
Position
20:complement(19298709..19319321)
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AA seq
1569 aa
AA seq
DB search
MAGGARLLWVSLLVLLGPQPGQGRPRERLRVRFTPAVCGLRCIHGPSGSHCTPICAPRNA
TSVDSGAPGGAAPGGPGFRAFLCPLICHNGGVCVKPDRCLCPPDFAGKFCQLHASGARPP
APAMPGITRSVYTMPLANHRDDEHGVASMVSVHVEHPQEASVVVHQVERVSGPWEEADPE
AVARAEAAARAEAAAPYTVLAQSAPREDGYSDASGFGYCFRELRRGECASPLPGLRTQDV
CCRGDGVAWGVHDCQPCSEHLGNRVGGSDGPCPTGFERVNGSCVDVDECATGGRCLHGEC
ANTRGGYTCVCPDGFLLDSSRSSCISQHVISEAKGPCFRVLRDGGCSLPILRNITKQICC
CSRVGKAWGRGCQLCPPFGSEGFREICPAGPGYHYSASDLRYNTRPLAQEPPRVSLSQPR
VPPATIRPPTGFLPTHRPEPRPQPQPRPESRPESRPESRPESRPESRPGPEFPLPSIPAW
TGPEIPEPGPSSGVCQRNPQVCGPGRCISRPGGHTCACDSGFRLSPQGTRCVDLDECRRV
PPPCAPGRCENTPGSFRCVCGPGFRASPRATECLDVDECHRVPPPCNRGRCENTPGSFLC
VCPAGYQAAPHGASCQDVDECTQSPGLCGRGVCENLPGSFRCVCPVGFRGSTCEEDVDEC
AQEPPPCGPGRCDNTAGSFHCACPAGFRSRGPGAPCQDVDECARSPSPCAYGRCENTEGS
FQCICPTGFQPNSAGSECEDVDECENHLACPGQECVNSPGSFQCRACPAGHHLHRGRCTD
VDECSSGAPCGLHGHCTNTEGSFRCSCAPGYRAPSGRPGPCADINECLEGDFCFPHGECL
NTDGSFACTCAPGYRPGPRGASCLDVDECSEEDLCQSGVCTNTDGSFECICPPGHRTGPD
QASCLDIDECREQGPALCGSQRCENSPGSYRCVRDCDPGYHTGPEGTCDDVDECQEYGSA
ICGAQRCENTPGSYRCVPACDPGYQPTPGGGCQDVDECRNRSFCGAHAMCQNLPGSFQCL
CDQGYEGARDGRHCVDVNECETLQGVCGAALCENVEGSFLCVCPSSPEEFDPMTGRCVPP
RTSAGTFPGSQPQAPASPSLPARPPPPSAPRRPGPPRQGPVGSERRECYFDTAAPDACDN
ILARNVTWQECCCTVGEGWGGGCRIQQCPGTETAEYQSLCPHGRGYLASSGDPSIWRDVD
ECQLFRDQVCKSGVCVNTAPGYSCYCSNGYYYHAQRLECVDNDECADEEPACEGGRCVNT
VGSYHCTCEPPLVLDGSRRRCVSNESQSLDDNLGVCWQEVGPDLVCSRPRLDRQATYTEC
CCLYGEAWGMDCALCPAQDSDDFEALCNVLRPPAYGPPRPGGFGLPYEYGPDIGPPYQGL
PYGPELYPPPVLPYDPYPPPPGPFARREAPYGAPPFDMPDFEDDGGPYGDSEAPEPPGRG
TGWSYRSRDTRGSFPEPEESSEAGGYAGALSERYEGLEAEDCGILDGCAHGRCVRVPEGF
TCDCFDGYRLDITRMACLDVNECDEREAASPLCVNARCVNTDGSFRCVCRPGFAPTHQPH
HCAPARPRA
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcggcgcgcggctgctctgggtgtcactcctggtgctgctcgggccccaaccc
gggcagggccggccccgagagcggctccgcgtgcgcttcaccccggccgtgtgcggcctg
cgctgcatccatgggcccagcggctcccactgcaccccgatctgcgcgccccgcaacgcc
accagtgtggacagcggcgcgcccggcggggcggccccggggggacccggcttccgcgcc
ttcctgtgtcctttgatctgtcacaacggcggggtgtgcgtgaagcctgaccgttgtctc
tgtcctccggacttcgctggcaagttctgccagttgcatgcctcaggagcccggcccccc
gcccctgccatgccaggcatcacccgctccgtgtacaccatgcccctggccaaccaccgc
gacgacgagcacggcgtggcgtccatggtgagcgtgcacgtggagcacccgcaggaggcg
tcggtggtcgtccaccaggtcgagcgagtgtcaggcccttgggaagaggcggatcccgag
gccgtggccagggcggaggcggcggcccgggcagaggcagctgcgccctacacggtgttg
gcccagagcgccccccgcgaggatggttactccgacgcctcgggcttcggttactgcttt
cgggaactgcgccgaggcgaatgtgcatcaccgctgcccgggctccgaactcaggacgtc
tgctgccgaggggacggcgtggcctggggtgttcacgactgtcagccatgctcagagcac
ctggggaacagagtgggtggctcggatggaccttgccccactggctttgagagggttaat
ggatcctgtgtagatgtggacgagtgtgcaacaggagggcgctgcctgcacggggaatgt
gccaacacacgcggcgggtacacgtgcgtgtgtcccgacggcttcctgctggattcatcc
cgcagcagctgcatctcccagcacgtgatttcagaggccaaggggccctgcttccgcgta
ctgagagatggcggctgctccctgcccattctgcgcaacatcaccaaacagatctgttgc
tgtagccgtgtgggcaaagcctggggtcgtggctgccagctttgcccacctttcggctcc
gagggttttcgcgagatctgccctgctggccctggctaccactactcagcctctgacctc
agatacaacaccagacccctggctcaggaaccacctcgagtttctctcagtcagccacgt
gtccctccagccactattcggccacctacaggctttctgcccactcatcgcccagaacct
cggcctcagcctcagcctcggcctgagtcccggcctgagtcccggcccgagtcccggcct
gagtcccggcctgagtcccgacctggccctgagtttcctctgcccagcatccctgcctgg
actggccctgagattcctgaaccaggcccttcttctggcgtgtgtcagcgcaaccctcag
gtgtgtggcccaggccgatgcatatctcggcctggtggccacacttgcgcctgcgactcg
ggtttccggttgagcccccagggtacccgctgtgtagacttggacgaatgtcgtcgggta
ccccctccttgtgctccgggtcgctgcgagaacacaccgggcagcttccgctgtgtgtgc
ggcccgggtttccgagccagcccgcgggctaccgagtgcctggacgtggacgagtgccac
cgcgtgccgccgccgtgcaaccggggccgctgcgagaacacacccggcagcttcctgtgt
gtgtgtcccgccgggtaccaggctgcgcctcatggagccagctgccaggatgtggatgaa
tgcacccagagcccgggcctctgtggccgaggggtctgtgagaacctgcccggctctttc
cgctgtgtttgcccggttggcttccggggctcgacatgtgaagaggatgtggatgagtgt
gcacaggagccaccaccctgcgggcccggccgctgtgacaacacagctggctccttccac
tgtgcctgccctgctggcttccgctcccggggaccaggggctccctgccaagatgtggac
gaatgtgcccgtagcccttcaccctgtgcctatgggcggtgtgagaacacagaaggcagt
ttccagtgcatctgccccacaggcttccaacctaactctgctggctcggagtgcgaggat
gtggatgagtgcgagaaccacctggcctgccctgggcaggagtgtgtgaactcacctggc
tccttccagtgcagggcctgccctgctggccatcatctgcatcgtggcagatgcactgat
gtggatgagtgcagttcaggagccccctgcggtctccacggccattgtactaacaccgaa
ggctccttccgctgcagttgtgcaccgggttaccgggcaccctcaggtcgacctggaccc
tgtgctgacataaacgagtgtctggagggtgacttctgcttcccccacggcgagtgcctc
aacaccgacggctccttcgcctgcacctgtgcccctggttaccggcccggaccccgcgga
gcgtcttgccttgatgtggacgagtgcagcgaggaggacctgtgccagagcggcgtttgc
accaacaccgatggctccttcgaatgcatctgccctccgggacaccgcacaggccccgac
caggcctcctgcctggatatcgacgagtgtcgcgaacagggcccagccctctgcgggtcc
cagcgctgtgagaactcgcccggctcttaccgctgcgtgcgggactgcgatcctggctac
cacactggcccggagggcacctgtgatgatgtggacgaatgccaggaatatggctctgcg
atttgtggagctcagcgttgtgagaacacccctggctcctaccgctgtgtcccagcctgt
gaccctggctatcagcctacgccaggcggcggctgccaggatgtggatgaatgccggaac
cggtccttctgcggtgctcatgccatgtgccagaacctacctggctccttccagtgcctc
tgtgaccagggatacgagggggcgagggacgggcgtcactgcgtggatgtgaacgagtgt
gaaacactgcagggtgtgtgtggagctgccttgtgtgaaaatgtcgaaggctctttcctg
tgtgtctgccctagcagccctgaggagtttgaccccatgactgggcgctgtgtccctccc
cggacttctgctggcacatttccaggctcacagccccaggcacctgccagtcccagtcta
ccagccaggccgcccccaccctctgcaccccgccggcccggcccacctagacagggtcct
gtgggcagcgaacgacgggagtgctactttgacacggcagccccggatgcctgtgacaac
atcctggcacggaatgtgacgtggcaggagtgctgctgtaccgtgggcgagggctggggc
ggcggatgccgcattcagcaatgcccgggcactgagacagctgagtaccagtccctgtgt
ccccacggccgtggctacctggcgtccagtggagacccgagcatttggcgagatgtggac
gaatgccagctcttccgggaccaggtgtgcaagagtggtgtgtgtgtgaacaccgcccca
ggctactcgtgttactgcagcaatggttactactaccatgcacagcggctggagtgtgtt
gacaatgacgagtgcgcggatgaggagccggcttgtgagggcggccgctgcgtcaacacg
gtgggctcctaccactgcacctgcgagcccccgctggtgctggacggctcccggcgccgc
tgcgtgtccaatgagagccagagcctcgatgacaacctgggagtgtgttggcaggaagtg
gggcctgacctcgtgtgcagtcggccgcggctggaccggcaggccacctacacggagtgc
tgctgtctgtatggggaggcctggggcatggactgtgccctctgccctgcccaggactca
gatgactttgaggccctgtgcaatgtgcttcgaccccctgcatacggccccccacggcca
ggtggctttggactcccctatgagtatggaccagacataggcccaccctaccagggcctc
ccctatgggccggagttgtacccgccccctgtgctgccctacgacccctacccacccccg
cccgggccctttgcacgtcgcgaggccccctatggagctcccccctttgacatgcccgac
tttgaggatgatggtggcccttatggcgattctgaggcgcctgagccacccgggcgaggc
accggctggtcctatcggtcccgggacacacgtggttccttcccagagcctgaggagtct
tcggaagcaggaggctatgccggcgccctgtctgagcgatatgaggggctggaggccgag
gactgcgggattctggatggctgtgcccatggccgctgtgtgcgggtcccagagggcttc
acttgtgactgctttgatggctaccgcctggacataacgcgcatggcttgcctggacgtc
aacgagtgcgacgagagggaggcggcctccccgctctgcgtcaatgcgcgctgcgtcaac
accgacggctccttccgctgcgtctgccgtccggggttcgcgcccacgcaccagccgcac
cactgcgcgcctgcgcggcccagggcctga
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