Perognathus longimembris pacificus (Pacific pocket mouse): 125367935
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Entry
125367935 CDS
T08928
Symbol
Cux1
Name
(RefSeq) homeobox protein cut-like 1 isoform X1
KO
K09313
homeobox protein cut-like
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125367935 (Cux1)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
125367935 (Cux1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
ATG17_like
Motif
Other DBs
NCBI-GeneID:
125367935
NCBI-ProteinID:
XP_048224622
LinkDB
All DBs
Position
1:71592337..71840468
Genome browser
AA seq
1563 aa
AA seq
DB search
MAANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDL
RKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLH
DIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTVRSQAETIALERGQKLQ
DDFAERERRLQESQLSTTSKLEEAEQKLHTLQTALEKTRTELFDLKTKYDEESTAKADEI
EMITTDLERANQRAEVAQREAESLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLE
VELAAKEREIAQLVDDVQSLQASLSKLRETSASQIAQLEQQLSAKNSTLKQLEEKLKGQA
DYEEVKKELNILKSMEFAPSDGAGMQDAAKPLEVLLLEKSRALQSENAALRISNSDLSGS
ARRKGKDQPESRRPGPMPASPPPQVPRGPGDQASNTNGTHQFSPAGLSQDFFNSSLASPS
LPLAPTGKYALNSLLQRQLMQTFYSKAVQEAGSTSIIFSTGPYSTNSISSPSSLQQSPDV
NGMAPSPSQSESAGSASEGEEIDTAEIARQVKDQLIKHNIGQRIFGHYVLGLSQGSVSEI
LARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQSLNRLFQEVPKRR
NGSEGNITTRIRASDTGSDDAIKSILEQAKRELQVQKTGTASSAAGPNVIKTIVRSVLVS
AEPVQPSSTSSSGNSDDAIRSILQQARREMEAQQAALDPALKPAPLSQPDLALLTPKLLS
ASPMSSVSSYSPLAISLKKTTEASTSALPSTPALKKEAPDVPGLDPQGTAEATQGVLRQV
KSELGRGGSWKDPWWNPMQPERRNPAPSDDAKAEEPAGAKDKAGGGQLRGPAATEYWKEW
PSAESPYSQSSELSLTGASRSETPQNSPLPSSPIVPLAKPAKPSVPPLTPEQYEVYMYQE
VDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRM
QLWLNGELGQGVLPVQGQQQGPALHSVTSLQDPLQPGCVSSESTPKTSASCSPAPESPMS
SSESVKSLTELVQQPCPSIDASKDGKGPEPSDPPASDSQPPTPLPPSGHSALSIQELVAM
SPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPF
VRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSISDSQPCEPPAVGIDYSQGASPQPQH
QLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRE
LFIEEIQAGSQGQAGASDSPSARSGRTAPGSEGDSCDGVEAADAEEPGGPTATAAAAAAA
TTTTTTTAKSQGGPAEAEAERGPEEAPRPAEPSGTPGTEDADDAGRPRPPPPPEGPTEGP
APCPAAPATAREDAATSAAAPAAGPGAAESSSALPSTSAPAATVPATAAAATTASATATT
AAAATATARRPSSLQSLFGLPDAAGARDSRDNPVRKKKAANLNSIIHRLEKAASREEPIE
WEF
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaatgtgggatcgatgtttcaatattggaagcgctttgatttacagcagctg
cagagagaactcgatgccacagcaacagtactggcgaaccggcaagatgagagtgagcag
tctcgaaagcggctcatcgagcagagccgggaattcaagaagaacactccagaggatttg
cgcaagcaggtagcaccgctgctgaagagcttccaaggggagattgatgcactaagtaaa
agaagcaaagaggcagaggcagccttcctaaacgtctacaagagactgattgatgttcca
gatcccgtgccagctctggacctggggcaacagctacagctcaaagtacagcgcctgcac
gacatcgagaccgagaaccagaaacttcgggagacacttgaagagtacaacaaggaattt
gctgaagtcaagaaccaagaggtgaccatcaaagcgctgaaggagaagatccgcgagtat
gagcagacggtgaggagccaggcagagaccatcgccctcgagcgcggccagaagctgcag
gatgacttcgcagagagggagaggaggctgcaggagagccagctgtccaccacctcgaag
ctggaggaagcggagcagaagctgcataccctgcaaacagccctggaaaaaactcgaacg
gaattatttgacctgaaaaccaaatacgatgaagaaagcactgcaaaggccgacgagatc
gagatgatcaccactgacctggagagagccaaccagagggcagaggtggcacagagagag
gcggagtccctgagggagcagctctcgtcggccaaccactccctgcagctcgcctcccag
atccagaaagccccggatgtggagcaggccatagaggtgctgacccgctccagcctggaa
gttgagttggctgccaaggagcgcgagatcgcccagctggtggacgacgtgcagagcctg
caggcaagcctgagcaagctgcgcgagacctcagccagccagatcgcccagcttgagcag
cagctgagtgccaagaacagcacgctcaagcaactggaagaaaaactcaagggtcaggct
gactatgaagaggtgaagaaggagctgaacatcctcaagtccatggagttcgccccgtca
gatggagcagggatgcaggatgccgcaaagcccctggaggtgctgctgctggagaagagc
cgcgccctgcagtcggagaacgcggccctgcggatctccaacagcgacctgagcgggtca
gccaggagaaaagggaaagaccagcctgagagtcggcgcccgggacccatgccggcctcc
cctcctccccaggtgccccgcggcccgggggaccaggcttccaatactaatggtacacac
cagttctcaccagcggggttaagtcaagactttttcaactcatccctggccagccccagc
ctacccctggctcctacaggaaaatatgcactaaactctcttctccagcggcagctcatg
cagaccttctactccaaggccgtacaggaagcaggaagcacaagcataattttttcaaca
ggtccatacagcacaaactccatctcttccccaagttcattacaacagagccccgatgtc
aatggcatggccccgtcgcccagccaatccgaaagcgctgggagcgcctcggagggcgag
gagatagacacggcggagatcgcccggcaggtcaaagaccagctcatcaagcacaacatt
ggacagcgaatctttggacattacgtcctgggactatcacaggggtctgtgagcgagatt
ctggcccggcccaagccgtggaataagttgaccgtccgtggcaaggagccgttccacaag
atgaagcagttcctgtcggatgagcagaacatcctggcccttcgcagcatccaaggcaga
cagagagagaatccaggccagagcctgaacagactatttcaggaagtaccgaaacgaaga
aatgggtctgaaggaaacatcaccacccggatccgagcctctgacactggctccgacgat
gccatcaaatccatcttggagcaggccaagcgggagttgcaagtgcagaaaaccggtacg
gcctcctccgccgccggccctaacgtcattaagacaattgtcaggagtgttctggtcagc
gctgagccggtccagccgtcttccacatccagcagtgggaactcagacgacgccatccgc
tccatcctgcagcaggcccgccgggaaatggaggcccagcaggccgccctggaccctgcc
ttaaagccagcaccactgtcccagcccgacctcgccctcctcacacccaagctcctgtcc
gcctcacccatgtcctccgtgtccagttactcgcctctcgccatctccctgaagaaaacc
accgaggccagcacctctgcactgcccagcaccccagccctcaagaaggaggccccggac
gttccaggcctggacccccagggcacggccgaggccacccagggggtcctgaggcaggtg
aagagtgagctgggccgcggcgggtcctggaaggacccctggtggaaccccatgcagccc
gaacggaggaaccccgcccccagcgacgatgccaaggcagaggagccggcgggtgccaag
gacaaggcgggcggcgggcagctgcggggccccgcggccaccgagtactggaaggagtgg
cccagcgccgagtctccgtactcgcagagctcggagctgagccttacgggagccagccgc
agcgagacgccccaaaacagccctctgccttcctccccaattgttcccctggccaagccc
gccaagccctcggtgccgccgctgacgcccgagcagtacgaggtgtacatgtaccaggag
gtggacaccatcgagctcacccggcaggtgaaggagaagctggccaagaatggcatctgc
cagcggatctttggggagaaggtgctaggcctgtcccagggcagcgtcagtgacatgcta
tcacgaccaaagccatggagcaagctgacccagaaaggccgagaacccttcatccggatg
cagctgtggctgaatggcgagctgggccagggcgtgctccccgtgcagggacagcaacaa
gggccagcactccactccgtgacgtcactacaggaccccctccagccgggctgcgtgagc
tcagaaagcactccaaagacctcggccagctgcagcccggcccccgaatccccaatgagc
tccagcgagtctgtgaagagtctaacggagctggtccagcagccttgtccctccatcgat
gccagcaaagacggcaaaggcccagagcccagcgacccaccagcctccgactcccagccc
cccaccccgctgcctccctcgggacactcagccctcagcatccaggagctggtggccatg
tctccagagctggacacctatggcataaccaagagggtcaaggaagtgctgacggacaac
aaccttggtcagcgcctgtttggagagaccatcctgggacttactcaaggctctgtgtct
gacctgcttgcccggccaaagccctggcacaagctgagcctgaagggccgggagcccttt
gtccgcatgcagctgtggctcaatgaccccaacaatgtagagaagctgatggacatgaag
cggatggaaaagaaagcctacatgaaacgacggcacagctccatcagtgacagccagccc
tgcgagccccccgccgtgggcattgactacagccagggcgccagcccccagcctcagcac
cagctcaagaaaccccgtgtggtgctggcccccgaagagaaggaagctctgaagagagcc
tatcagcagaagccatacccgtcaccaaaaaccatcgaggaactagccacccagctcaac
ttgaagaccagcaccgtcatcaactggttccacaactacaggtctcggatccgcagagaa
ctgttcatcgaggagatccaggccgggagccagggccaggccggcgccagcgactcgccg
tcggcccgcagcggccgcaccgcacccggctcggagggcgacagctgcgacggcgtggag
gccgcggacgccgaggagccgggcggccccaccgccaccgccgccgccgccgccgccgcc
accaccaccaccaccaccaccgccaagtctcagggagggccggccgaggccgaggccgag
cgcgggccggaggaggcgccgcggcccgccgagccctcggggaccccgggcacggaggac
gccgacgacgcaggccggccgcggccgccgccgccccccgagggccccaccgagggcccc
gcgccctgccccgccgcgccagccaccgcccgggaggacgccgctacctcagccgccgcg
cccgccgcgggccccggcgccgccgagagcagttccgccttgccaagcaccagcgcgccc
gccgccaccgtccccgccacggccgccgccgccaccaccgcctccgccaccgccaccacg
gccgccgccgccaccgccaccgcacgcaggcccagctcgctgcaaagccttttcggcctg
cctgacgccgcgggcgcccgggactcacgggacaacccggtgcgcaagaagaaggccgcc
aacttgaacagcatcatccaccgcctggagaaggccgccagccgcgaggagcccatcgaa
tgggagttctga
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