Perognathus longimembris pacificus (Pacific pocket mouse): 125368002
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Entry
125368002 CDS
T08928
Symbol
Chsy1
Name
(RefSeq) chondroitin sulfate synthase 1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
plop01100
Metabolic pathways
Module
plop_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
125368002 (Chsy1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
plop01003
]
125368002 (Chsy1)
Enzymes [BR:
plop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
125368002 (Chsy1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
125368002 (Chsy1)
Glycosyltransferases [BR:
plop01003
]
Glycan extension
O-Glycan
125368002 (Chsy1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
DUF7164
Motif
Other DBs
NCBI-GeneID:
125368002
NCBI-ProteinID:
XP_048224741
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All DBs
Position
20:complement(38017349..38062144)
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AA seq
806 aa
AA seq
DB search
MAARGRRAWLSMLLGLVVGFVLASRLVLPRASELKRVGPRRRASLEGCRPGPGAAGAAAA
QAGGARGEARGAQLWSHGSAPDGGQRDRNFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGK
VQFFSSEGSDTSIPIPIVPLRGVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYI
KGDRLESFLRSLNSSEALFLGQTGLGTTEEMGKLALEPGENFCMGGPGVIMSREVLRRMV
PHIGKCLREMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEQNKKGYIRDLHNSK
IHRAITLHPNKNPPYQYRLHSYVLSRKVAELRHRTIQLHREIVLMSKYSNTDARKEDLQL
GIPPSFMRFQARQRQDILEWEFLTGKYLYSAVDGQPPRRGMDSAQREALDDIVMQVMEMI
NANAKTRGRIIDFKEIQYGYRRVSPMYGAEYILDLLLLYKKHKGKKMTVPVRRHAYLQQT
FSKIQFMEHEELDAQALAGRINQDSGSLSFLSNSLRKLVPFPLPGARSERREPADRKINI
LIPLSGRFDMFVRFMGNFEKTCLIPNQNVKLVVLLFNSDSNPDKAKQVELMRDYRAKYPK
ADMQILPVSGEFSRALALEVGSSQFNNESLLFFCDVDLVFTADFLQRCRANTVLGQQIYF
PIIFSQYDPKIVYSGKAPSDNHFAFTQKTGFWRNYGFGITCIYKGDLVRVGGFDISIQGW
GLEDVDLFNKVVQAGLKTFRSQEVGVVHVHHPVFCDPNLDPRQYKMCLGSKASTYGSTQQ
LAEMWLEKNDPGSSRSSNNNGSSRTA
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgcggccggcgcgcctggctcagcatgctgctcgggctggtggtgggcttc
gtgctggcctcgcggctcgtgctgccccgcgcctccgagctgaagcgggtgggcccgcgg
cgccgggccagtctggagggctgccggccgggcccgggggcggcgggggccgccgcagcc
caggccggcggggcgcgcggcgaggcgcgcggggcgcagctctggtcccacggctcggct
ccggatggcggtcagcgcgaccggaactttctcttcgtgggagtcatgacggctcagaaa
tacctgcagacccgcgccgtggcggcctacagaacgtggtccaagacgattcctgggaag
gtgcagttcttctctagtgagggctcagacacgtctatcccgatccccatagtgccgctc
cgaggcgtggacgactcctacccgccccagaagaagtccttcatgatgctcaagtacatg
catgaccactacctggacaagtacgaatggttcatgagagccgacgatgacgtttacatc
aaaggagatcgcctggagagtttcctgaggagtttgaacagcagcgaggcgctttttctt
gggcagacaggactgggcaccacggaagaaatggggaaactggccctggaacctggtgag
aacttctgcatggggggccccggcgtgatcatgagccgggaggtgcttcggaggatggtg
ccccacatcggcaagtgtctgcgggaaatgtacaccacgcacgaggatgtggaggtggga
agatgtgtccggaggtttgcaggcgtgcaatgtgtctggtcgtacgagatgcagcagctc
ttttacgagaattatgaacagaacaagaaggggtacatcagagatctccacaacagtaag
attcaccgcgccatcacgctgcaccccaacaagaacccgccctaccagtaccggctgcac
agttacgtgctcagccgcaaggttgccgagctgcgccaccgcaccatccagctccaccga
gaaatcgtgctcatgagcaagtacagcaacacggacgcccgcaaggaagacctgcagctg
ggcatcccgccatccttcatgcgcttccaggcccgccagcgccaggacatcctggagtgg
gagttcctgacggggaagtacctgtactccgccgtggacggccagccgccccgcaggggg
atggactcggcccagagggaggccttggatgacatcgtcatgcaggtgatggagatgatc
aatgccaacgccaagacccgggggcgcatcatcgacttcaaggagatccagtacggctac
cgccgcgtgagccccatgtacggcgccgagtacatcctggacctgctgctcctgtacaag
aagcacaaaggcaagaagatgacggtgcccgtgcgcaggcacgcctacctccagcagacc
ttcagcaagatccagttcatggagcacgaggagctggacgcgcaggcgctggcgggcagg
atcaaccaggactcgggctccctgtccttcctctccaactccctgcggaagctcgttccc
ttcccgctccccggggcccggagcgagcgcagggagcccgcagacaggaagatcaacatc
ctcatccctctgtccggacgcttcgacatgttcgtgaggttcatggggaactttgagaag
acctgcctcatcccaaaccagaacgtgaagctcgtcgtgctgctcttcaattccgactcg
aaccccgacaaggccaagcaagtggagctgatgagagattaccgcgccaagtacccgaag
gccgacatgcagattttgcccgtgtctggagagttctccagagctctggccctggaagtg
ggctcctcgcagtttaacaatgagtctttgctcttcttctgtgacgtggacctcgtgttc
acggcggacttcctacagcggtgtcgagcaaacacggtcctgggccaacagatctatttc
ccgatcatctttagccagtatgatccaaagattgtttatagcggcaaagctcccagtgac
aaccattttgccttcactcagaaaactggcttctggagaaactatggctttggcattacg
tgtatttataagggcgaccttgtccgagtaggcggcttcgacatctccatccagggctgg
gggctggaggacgtggacctcttcaacaaggtggtccaggcaggcctgaagacgttccgc
agccaggaggtaggcgtggtgcacgtgcaccaccccgtcttctgcgaccccaacctggac
ccccggcagtacaagatgtgcctgggatccaaggcctccacctatgggtccacacagcag
ctggcggagatgtggctggaaaagaatgacccgggctccagcagaagcagcaataacaac
ggctcctcgagaacagcctag
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