Perognathus longimembris pacificus (Pacific pocket mouse): 125368016
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Entry
125368016 CDS
T08928
Symbol
Clasp1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125368016 (Clasp1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
plop04812
]
125368016 (Clasp1)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
125368016 (Clasp1)
Cytoskeleton proteins [BR:
plop04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
125368016 (Clasp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
HEAT_GCN1
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
HEAT_MROH2B_C
TOR1L1_N
TPR_CAND1
Sec7-like_HUS
Cnd1
HEAT_2
VPS15-like_hel
Ltn1_1st
RTP1_C1
TPR_DNAAF5
MMS19_N
HEAT_DAAF5
ParcG
MMS19_C
TAN
Motif
Other DBs
NCBI-GeneID:
125368016
NCBI-ProteinID:
XP_048224766
LinkDB
All DBs
Position
20:5348178..5600520
Genome browser
AA seq
1488 aa
AA seq
DB search
MEPRMEACLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATCWVN
SSNYKVVLLGMDILSALVSRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAHTLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN
FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRIGSSTLGSKSSAAKEGAGAVDEE
DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSMSTTGSLQRSRS
DIDVNAAASAKSKVSSSSGATPFSSAAALPPGSYASLESRHMREDMEYIGLDAGRIRTRR
QSSGSATNVASTPSDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLAGG
SSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVNAMRVLSTSTD
LEAAVADALLLGDTRSKKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYL
RQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSK
RVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFP
FDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWT
TEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTSVGS
PSNTIGRTPSRHHSSRTSPLTSPTNCSHGGLSPSMLDYDTENLNSEEIYSSLRGVTEAIE
KFSFRSQEDLNEPIKRDGKKDCDIVSRDGGAASPATEGRGNSEVEGGRTALDNKTSLLNT
QPPRAFPGPRARDYNPYPYSDTINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKE
LSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVL
REILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPI
IQTADYPINLAAIKMQTKVVERIAKESLLQLLADIIPGLLQGYDNTESSVRKASVFCLVA
IYSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcgcatggaggcctgcctggctcaggtgttgcaaaaggatgtggggaaacga
ctacaggttggccaagaacttatagactatttctcagacaaacagaaatctgctgacctt
gagcatgaccagaccatgttagataagcttgtggatggacttgctacctgttgggttaat
tctagcaattataaggtggttcttctgggcatggacatcctgtcggccctggtgtcccgg
ctgcaagatcgattcaaagcgcagataggcacagtgctgccaagtctaatagacagactg
ggagatgctaaagactctgtgagggagcaagaccaaactctgctgctaaagatcatggat
caagctgctaatccccagtatgtatgggacagaatgcttggaggcttcaaacataagaat
ttccgcacgagagaaggcatctgtctctgccttattgcaacactcaacgcctctggagca
catactctaacactaagcaagattgtgccacatatatgtaatttacttggagatccaaat
agccaggttcgagatgcagcaataaacagcttagtggaaatttacagacatgtaggagaa
cgtgtgagggcagatctcagtaaaaaaggattgccacagtcccggttgaatgtcattttt
acaaaatttgatgaagtccaaaaatctggaaacatgatacaatctgcaaatgataaaaac
tttgatgatgaagattctgtggatggtaatagaccttcctcagccagttctacatcatcc
aaggccccaccaagctcacggagaaatgtcggaatggggaccacccgtcggattgggtcg
tctactcttggatccaagtcttcagctgcaaaagaaggtgctggtgctgttgatgaagaa
gactttattaaagcatttgatgatgtacctgtagtgcagatttattccagccgagacctc
gaggaatccataaataaaattagggaaatattatctgatgacaagcatgactgggagcag
agagtaaatgctctaaaaaagattagatctttacttttggctggagctgctgaatatgat
aacttctttcaacatttgcgtcttttggacggagcctttaaactctctgctaaggatctg
cggtctcaggtagtgcgggaggcttgtatcacgttggggcatctgtcatcagttctgggg
aataagtttgaccatggagctgaagccattatgccaactatctttaatttaattccaaac
agtgccaaaattatggccacttctggtgttgtagctgttagattaatcattcggcataca
catatccctaggctaatacctgtcataacaagtaactgtacctccaaatctgttgcagtt
agaaggcgctgttttgaattcttagatttactcttacaagaatggcagacacattctctg
gaaagacacatatcagtattagcagaaacaatcaagaaaggaatacatgatgctgattca
gaagcaaggatagaagccagaaaatgttactggggttttcacagtcacttcagcagagaa
gcagagcacttgtaccacaccttggagtcctcttaccagaaggccctgcagtcccacttg
aagaactcggacagcatagtgtccctgcctcaatcagaccgctcatcttctagctctcaa
gagagtctcaaccggccactctctgccaaaagaagtcccactggcagtaccacatctaga
gcttctacggttagtaccaaatctatgtcgacaaccgggtccctccagcgatctcgaagt
gatattgatgtgaatgcagctgccagtgccaaatccaaagtctcctcctcttcaggcgcc
acacccttcagctctgcagcagcattacctccagggtcctatgcatctttagaatccaga
cacatgagggaagacatggagtacataggcctggatgcaggtcggatccgcacaagacgg
caaagttctgggagtgccaccaatgtcgcctctacaccttctgacaaccggggccgcagc
cgcgctaaagtggtttcacagtctcagcgatccagatctgctaatcctgctggtgctggc
agccgatcaagttccccagggaaattgctgggcagtggttatggtggacttgctggcggt
tcctcaagaggtccacccgtgacaccttcttcagaaaaacgaagcaaaattcctaggagt
cagggatgtagccgagaaacaagtccaaaccgaataggattagaccggtttgggctgggt
cagccaggaagaatacctggttctgtgaatgccatgcgggttttgagcacaagtacagat
ctggaagccgctgttgctgatgctttgctgttaggagacaccaggagcaagaagaagcct
gtgaggaggagatatgagccatatggaatgtattctgatgatgatgccaacagtgatgcc
tcaagtgtttgctctgagcgttcatacggctcgaggaatggtggcattcctcactatctg
cgacagactgaagatgtagcagaagttctcaaccactgtgctagttcaaactggtcagaa
aggaaagaagggcttctgggcctgcaaaatttacttaagagccaaagaacactgagtcga
gtagagttaaagagattatgtgagattttcacccgaatgttcgctgacccccatagcaag
agagtttttagtatgtttttggagactcttgtggattttataataatacataaggatgac
ttgcaagactggctttttgttcttctcacacaactgcttaagaaaatgggagcagattta
ctgggatctgtgcaggcaaaagttcagaaggctttggatgtcacaagggactcctttcca
tttgatcaacaatttaacattttgatgagatttattgtggatcaaactcaaactccaaac
ctcaaggtcaaagttgcaatcctgaaatacattgaatctctggctagacagatggatcca
acagattttgtaaactcaagtgagacaagacttgctgtttctagaatcataacgtggaca
acagaaccaaagagttcagacgtgagaaaggctgcacagattgtgctaatctccctgttt
gagttgaacacgcctgaatttaccatgttacttggtgccttgccaaaaacattccaggat
ggtgccaccaaactcctgcataaccacctcaagaactctagtaacaccagtgtgggatct
ccaagcaatacaattggcagaacaccttcccgacatcacagcagcaggaccagcccccta
acctcacccaccaactgttcccatgggggactgtctcccagcatgctggactatgataca
gagaacctgaactctgaagaaatctacagttctctgcgtggagttacagaagccattgaa
aagtttagtttccgaagtcaagaagatctgaatgaaccaattaagcgagatggcaaaaaa
gactgtgatattgtatcccgtgatggaggagcagcctcacctgccacggagggccgggga
aacagcgaagtggaaggaggcaggacagctctggacaacaagacctctctcctcaacacc
cagcctcctcgagccttccccggaccacgtgctcgggactacaacccatatccctactca
gacacaatcaacacatacgacaagacggccctgaaggaggcagtgtttgatgatgacatg
gagcagcttcgcgatgttcccatcgatcactctgacctggtggctgacctgctgaaagag
ctgtctaaccacaacgaacgcgtggaggagcggaaaggtgccctgctggagctgctcaag
atcacacgagaggacagcctgggtgtctgggaggagcacttcaagaccatcctgctgctg
ctgctggagacacttggggacaaagaccattcaatccgagcactggcactgagagtttta
cgggaaattcttagaaaccagccagcaagatttaagaactacgcagagctgacgatcatg
aagacgctagaagcccacaaagactctcacaaggaggtggtaagggctgccgaggaggct
gcatccacactggccagctccattcaccctgagcagtgcatcaaagtgctctgccccatc
atccagacagctgactaccccatcaatctggctgccatcaagatgcagaccaaagttgtg
gaaaggatcgccaaggagtccttgctgcagctccttgcagacatcatccctggcttgctg
cagggttatgacaataccgaaagcagcgtgcgtaaggccagcgtgttttgcttagtggcg
atttattccgtaatcggagaagatctgaaacctcacctcgcacagctcacagggagcaag
atgaagctcctaaacttatacataaagagggcccagactaccaacagcaacagcagctcc
tcctccgacgtgtccacgcacagctag
DBGET
integrated database retrieval system
