KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125368035
Entry
125368035         CDS       T08928                                 
Symbol
Polr2j
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03020  RNA polymerase
plop03420  Nucleotide excision repair
plop05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:plop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125368035 (Polr2j)
  09124 Replication and repair
   03420 Nucleotide excision repair
    125368035 (Polr2j)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    125368035 (Polr2j)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:plop03021]
    125368035 (Polr2j)
   03400 DNA repair and recombination proteins [BR:plop03400]
    125368035 (Polr2j)
Transcription machinery [BR:plop03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     125368035 (Polr2j)
DNA repair and recombination proteins [BR:plop03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      125368035 (Polr2j)
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L SHNi-TPR
Other DBs
NCBI-GeneID: 125368035
NCBI-ProteinID: XP_048224815
LinkDB
Position
1:complement(71915215..71918424)
AA seq 117 aa
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaacgctcctccggctttcgagtcgttcttgctcttcgagggcgagaagaagatcacc
atcaacaaagacaccaaggtgcccaacgcctgtctcttcaccatcaacaaggaagaccac
acgctggggaacatcattaagtcacagctgctcaaggacccgcaggtgctgtttgcgggc
tacaaggtcccccaccccctggagcacaagatcatcatccgagtgcagactacccctgac
tacagcccccaggaggccttcaccaacgccatcaccgacctcatcagcgaactctccctg
ctggaggagcgcttccgggtggccatcaaagacaagcaggaagggatcgagtag

DBGET integrated database retrieval system