Perognathus longimembris pacificus (Pacific pocket mouse): 125368041
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Entry
125368041 CDS
T08928
Symbol
Npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125368041 (Npas1)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
125368041 (Npas1)
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GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
125368041
NCBI-ProteinID:
XP_048224831
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All DBs
Position
20:21385667..21394862
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AA seq
582 aa
AA seq
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MATPFPGSGGGGEVKCGGGGGAGVPWDFLPGLMVKAPPGPCLQAQRKEKSRNAARSRRGK
ENLEFFELARLLPLPGAISGQLDKASVVRLSVSFLRLRRFAALGAPPWGLRAVGPPAGLA
PGRRSARALVSEVFEQHLGAHILQSLDGFVFALNQDGKFLYISETVSIYLGLSQVELTGS
SVFDYIHPGDHSEVLEQLGLQAQTPAPPTPPSASSSSASSSASSLAEGPEIEPRPAEARP
PARAQERSFFVRMKSTLTKRGLHVKASGYKVIHVTGRLRARALGLVALGHALPPAPLAEL
PLHGHMVVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDATRIRQSHLDLL
DKGQVVTGYYRWLQRAGGFVWLQSVATVAGNGKSPGEHHVLWVSHVLSQAEGGQTPLDAF
QLPACEDAPSPESEPPEGDPPADGKGAASAKNEAPQDRGKCIKVEPGPRERRGSEDSAEE
EPAAPPRPEFTSVIRAGAPKLDPIRPWGLAPAGDPAPALLHAGFLCTPGAIGAIRYGPAE
LGLVYPHLQRLAPGPALPEAFYPSLSLPYPGPAGARVPRKGD
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccccttccctgggagcggcggcggcggcgaggtcaagtgcgggggaggcggc
ggcgccggcgtcccctgggactttctgcccgggctgatggtcaaggccccgcccggaccc
tgcctgcaggcgcagcgcaaggagaagtcccgcaacgcggcgcgctcccggcgcgggaag
gagaacctggagttcttcgagctggcccggctgctgccgctgcccggcgccatctccggc
cagctggacaaggcgtcggtcgtgcgcctcagcgtcagcttccttcgcctgcgccgcttc
gccgccctcggggcgccgccctgggggctgcgggccgtggggccgcccgccggcctcgcc
ccaggccggcggagcgccagggcgcttgtatccgaggtctttgaacagcatctgggggcg
cacatcctgcagtccttggatggcttcgtgtttgccttgaaccaggatggaaaattcctc
tacatctcagaaacagtctccatatacctgggactctcacaggtggagctgacgggcagc
agcgttttcgactacatccaccccggggaccactcggaggtgctggagcagctggggctg
caggcccagacccccgcgccgcccaccccaccttccgcctcctcctcctcggcctcctcc
tccgcctcctcgctggccgaagggcccgagatcgagccccgccctgccgaggcacgccct
cccgcccgcgcgcaggagcgctccttcttcgtgcgcatgaagtccacgctcaccaagcgg
ggcctgcacgtgaaggcctcgggatacaaggtcatccatgtgactgggcgactgcgtgcc
cgggccttgggcctggtggctctgggccacgcgctgcccccggccccgctggctgagctg
cctctccacggacacatggtggtcttccgcctcagcctgggtctcaccatcctcgcctgt
gagagcagggtgagcgaccacatggacctgggcccctccgagctggtgggccgcagctgt
taccagtttgttcatggacaggatgcaaccaggattcgccaaagccacctggacctgctg
gacaaggggcaggtggtgactggttactaccgctggctgcagcgagctgggggctttgtg
tggctgcagtctgtggccaccgtggctggcaacgggaagagcccaggggagcaccatgtg
ctctgggtcagccatgtgctcagccaagctgaaggcggccagacacctctggatgccttc
cagcttccggcctgtgaggacgcgcccagcccggagtcagagcctccagaaggggaccct
ccggcagacgggaagggggccgcctccgccaagaacgaggcccctcaggaccggggcaaa
tgcatcaaagtggagccgggccccagggaaaggcggggctccgaggacagcgcggaggag
gagcctgcggcccctccacggcccgagttcacatccgtcatccgcgcgggggctccgaag
ctcgacccgattcggccatggggcctggcgcctgccggggaccccgcacccgccctcctc
catgccggcttcctgtgcacgccgggggccatcggggccatccgctatggccctgccgag
ctgggcctcgtgtacccacacctgcagaggctggccccgggccccgcgctccccgaagcc
ttctatccctcccttagcctaccctaccccgggccggcaggggcgcgggtgccgcggaag
ggagactga
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