Perognathus longimembris pacificus (Pacific pocket mouse): 125368047
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Entry
125368047 CDS
T08928
Symbol
Efl1
Name
(RefSeq) LOW QUALITY PROTEIN: elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125368047 (Efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plop03009
]
125368047 (Efl1)
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
Pre-60S particles
GTPases
125368047 (Efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
EF-G_D2
GTP_EFTU_D2
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
125368047
NCBI-ProteinID:
XP_048224844
LinkDB
All DBs
Position
20:28831314..28879318
Genome browser
AA seq
1129 aa
AA seq
DB search
MVLNSVDKTVQLQKNAANIRNICVLAHVDHGKTTLADCLISSNGIISSRLAGKLRYLDSR
EDEQVRGITMKSSAISLHYAQGGEEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKLDRLIVELKFTPQEAYSHLKNILEQINALTGTL
FTSKVLEERAEREAESHVNASSEPGELVYDWSAGLEDTDDSHLYFSPEQGNVVFTSAVDG
WGFGIEQFAKIYSKKIGIKKEVLLKTLWGDYYINMKAKKIMKADQAKGKKPLFVQLILEN
IWSLYDAVLKKDKEKIDKIVTSLGLKLGAREARHSDPKVQINAICSQWLPVSHAVLAMVC
QKLPSPLEITSERVERLMCAGSQTFDSLPPETQALKAAFMNCGSEDTAPVIIFVSKMFAV
DAKVLPQNKTRPLTQEEIAQRRERARKRHAERLTAAQGQGAHRAQPRREHLQTSPQGEEP
KGDEQEVESVASTPVPQEESNQESFIAFARVFSGVARRGKKIFVLGPKYSPLEFLQRVPS
GFSAPLDDLPPVPHMACCVLENLYLLMGRELEELEEVPPGNVFGIGGLQDFVLKSATLCS
LPSCPPFIPLSFEATPIVRVAVEPKHPSEMPQLMKGMKLLNQADPCVQILIQETGEHVLV
TAGEVHLQRCLDDLKERFAKIHISVSEPIIPFRETITKPPKVDMVNEEIGKQQKVAVIHQ
TREDQNKVPEGVQVDSDGLITMTTPNKLATLSVRALPLPEEVTQILEENSDLIRSMEHLT
SAMNEGKNTQVIHQKTQEKIWEFKGKLEQHLTGRKWRNTVDQIWSFGPRKCGPNILVNQS
EDFQNSVWTGPAGRASGEARRYRDFGNSIVSGFQLAALSGPMCEEPLMGVCFVLEKWDLS
KFEDQGTSEEQNQEQGDVAPGERQGEGETPPSGDPDQGQQEGCTELFEKTASPKGDVLVS
DCYGPFSGQLIATMKEACRYALQVKPQRLMAAMYTCDIMATSDVLGRVYAVLSKREGRVL
QEEMKEGTDMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVIPSDPFWVPTTE
EEYLHFGEKADSENQARKYMNAVRKRKGLYVEEKIVEHAEKQRTLSKNK
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcaatagcgtggacaagacggtccagctgcagaagaacgccgccaacatcaga
aacatctgtgtcttggctcacgtcgaccatggaaaaactactcttgctgattgtcttata
tctagtaatggaatcatctccagccgcctggcaggcaagttgcggtacctggacagcagg
gaagacgagcaggtccgggggatcaccatgaagtctagcgccatttcactacattatgcc
caaggtggtgaggagtacctgattaacctgatagactccccaggacacgtagatttctct
tctgaagtgtcaactgctgtccggatttgtgatgggtgtatcatcgtggtggacgctgtg
gaaggggtctgcccacagacacaggctgttctgcgacaagcttggctagaaaacatccgt
ccggtattggtgattaataagctggatcgcttgatagtggagctaaaattcaccccacag
gaggcctattctcatctcaagaatattttagaacagattaatgcactgacaggaactctt
tttacatctaaagtcctagaagaaagagcagagagggaggcggaatcccacgtgaatgca
agctctgagcccggggagctggtgtacgactggagcgctggcctggaggacacggatgac
tcccacctgtacttctctccagagcagggcaacgtggtctttaccagcgcagttgatggc
tggggctttggaattgagcaatttgccaaaatctatagtaaaaaaattggcatcaaaaag
gaagttcttttgaaaactttgtggggagattattacataaatatgaaggctaagaagatt
atgaaggctgatcaggccaaaggaaagaaacctttatttgtacaattgatcctggaaaat
atatggagcttgtatgatgctgtcttgaaaaaggataaggaaaaaattgacaaaatagtg
acttctttaggattaaaacttggagcccgggaggcacgacattcagaccccaaagtccag
atcaatgccatctgtagccagtggctccctgtgtcccatgctgtcctcgctatggtgtgt
cagaaactgcccagtcctcttgagattacgtcggagagagtggagagactgatgtgtgca
ggatcgcagacgtttgactcccttccgccagaaactcaagccttgaaagcagcttttatg
aactgtggaagtgaagacactgctcctgtcattatcttcgtttccaaaatgtttgcagtg
gatgccaaggtcttgcctcagaataaaacaaggcctctcacacaagaagagattgctcag
agacgggagcgtgcgaggaaaaggcatgcagagaggcttacagctgcacagggccagggc
gcccacagagcccagcccagacgagagcaccttcaaacgagtccacagggtgaagaacca
aaaggtgatgagcaggaagtggagagtgtggcttctacccctgttccccaggaagaaagc
aaccaagagtctttcattgcatttgctcgagtgttcagtggtgtagctcgaagaggaaag
aaaatttttgttttggggcccaagtacagtccacttgaatttttgcagcgggtaccatca
ggcttctctgctccactggatgacctccccccggtccctcacatggcatgctgtgtgctg
gagaacctctatctcctgatgggacgggagctagaggaactggaggaggtgcctcctggc
aatgtgtttgggataggaggccttcaagactttgtactgaagtctgcaaccctgtgcagc
ctgccatcctgtcccccgtttataccactcagctttgaagccaccccgatcgtcagagtt
gctgttgagccaaaacatccaagtgagatgcctcagctcatgaaaggaatgaagctgttg
aaccaggcagatccatgcgtgcagatcttgattcaggagacaggagaacacgttttggtt
acagctggagaagtccatctgcagcggtgcttagatgatttaaaggaaaggtttgcaaag
attcacatcagtgtatctgaacccattattccattcagagaaacgatcacaaaacctcca
aaggtggacatggtcaatgaagaaataggcaaacaacaaaaggttgcagtcatacaccaa
acaagagaagatcagaacaaagttcctgaaggcgtccaagtcgactctgatgggctgatc
accatgaccactcccaacaagctggccacgctcagtgtgcgagccttgccccttccagag
gaggtcactcagatcctggaggaaaacagtgatttgattcgttccatggagcacttgacc
tctgctatgaatgagggcaaaaatactcaggtgattcatcagaagacccaagagaaaatc
tgggaattcaaaggaaaactagagcagcatctaacaggaaggaaatggaggaataccgtg
gaccaaatatggtcatttggcccaagaaaatgtgggcccaacatcctagtcaatcagagc
gaggactttcagaactctgtgtggacgggccccgcgggcagagcgtcgggggaagccagg
agataccgggatttcggcaatagcatcgtgagcggcttccagctggcagccctctccggc
cccatgtgtgaggagcccctcatgggtgtctgctttgtcctggagaaatgggacctgagt
aaatttgaggaccagggaaccagtgaggaacagaatcaagagcaaggcgatgtggcgcct
ggagagcggcaaggggaaggtgagacccctcccagtggggacccagaccagggtcagcag
gaaggctgcacggagctctttgagaagacagcatccccaaaaggagatgtgttggtctct
gactgctacgggcccttctcggggcagctgattgccaccatgaaagaggcatgtcgatac
gccctgcaggtgaagccacagcgcctgatggcagccatgtacacgtgcgacatcatggcc
accagcgatgtcctcgggcgagtctatgctgtcttatcgaagagagaaggccgagtgctt
caagaagaaatgaaagaaggcaccgacatgttcatcatcaaggctgtgctgcctgtggcc
gagagctttggctttgctgatgaaatcaggaagaggacgagtggccttgccagccctcag
ctggtgttcagccattgggaggtcatccccagtgaccccttctgggtgcccaccacggag
gaggagtacctgcacttcggggagaaggcggactcggagaaccaggcccggaagtacatg
aacgctgtgcggaagcggaaaggtctctatgtggaagaaaagattgtggagcatgcggaa
aagcagagaacactcagcaaaaataagtag
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integrated database retrieval system
