Perognathus longimembris pacificus (Pacific pocket mouse): 125368053
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Entry
125368053 CDS
T08928
Symbol
Mex3b
Name
(RefSeq) RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125368053 (Mex3b)
04121 Ubiquitin system [BR:
plop04121
]
125368053 (Mex3b)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125368053 (Mex3b)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125368053 (Mex3b)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125368053 (Mex3b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-C3HC4
KH_2
KH_DEAH11_2nd
Prok-RING_4
RING_XB3-XBAT31
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
125368053
NCBI-ProteinID:
XP_048224852
LinkDB
All DBs
Position
20:28894746..28897315
Genome browser
AA seq
541 aa
AA seq
DB search
MPSSLFADLERGGGGESPDEQSALRLALDQLSLLGLDDEGAAPYGEPRRRSVNMTECVPV
PSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVAMARREIISAAE
HFSMIRASRHKSAALSGGAAPGPPALPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTH
TYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIALRTGGLVELPDGNDFHANGTDVGFD
PHGAGAGALWSKASPGRKPFASFRNDSSSSLGSASTDSYFGGAGGSAAATPRLADFSPPS
PALGFAHNGTSSNGNGFTFAGEAAAPSPEGSEPPPAFDPAPAPPPGAPLLWAPFERSPGP
ASAATASTATASTTASAATAFPAAPSGASLGPGPGSRRLLPGSCPRLSPPLHAAPGTGEH
RLARRVRSDPGGGGLAFAYASGLGAPPPGLPPTDPAGDAAGSSSASSSSSSSSSSSCSSS
GPRRKGSRDCAVCLESEVIAALVPCGHNLFCLECAHRICQRSEPRCPVCHAAVTQAIRIF
S
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcgctgttcgcagacctggagcgcggcgggggcggggagagcccggacgag
cagagcgccctgcggctggcgctggaccagctgtccctgctggggctggacgacgagggc
gccgcgccctacggcgagccccgcaggcggagcgtgaacatgaccgagtgcgtgccggtg
cccagttccgagcacgtcgcggagatcgtggggaggcaaggttgtaagatcaaggccctg
cgcgccaagaccaacacgtacatcaagacgccggtgcgcggcgaggagccggtgtttgtg
gtgactggccgcaaggaggacgtggccatggcacggagggagatcatctcggcggcagag
cacttctccatgatccgcgcctcccgccacaagagcgcggcgctgagcggcggggcagcg
cccggcccgcctgcgctgccggggcaaaccaccatccaggtgcgagtgccctaccgcgtg
gtggggctggtggttgggcccaagggcgccacgatcaagcgcatccagcagcagacgcac
acctacatcgtgacgcccagccgcgacaaggagcccgtgttcgaggtcacaggcatgccg
gagaacgtggaccgcgcgcgcgaggagatcgaggcgcacatcgcgctgcgcacgggcggc
ctggttgagctccccgacggcaacgacttccatgcgaacggcaccgacgtgggcttcgac
ccgcatggcgccggcgcaggcgcactctggagcaaagcctcgccaggccgcaagcccttc
gccagcttccgcaacgacagctccagctccttgggcagcgcctccaccgactcctacttt
gggggcgcagggggcagcgcggccgccaccccgcgcctggccgacttcagtccccccagc
cctgcgcttggcttcgcacacaacggaaccagcagcaacggcaatggcttcacctttgcg
ggggaggctgcagcgccgtcccccgagggctcggagccgccgcccgccttcgaccccgcg
cctgccccgccgcctggcgcgcctctgctctgggcgcccttcgagcgctcccctggcccg
gcctccgccgccacggcctccaccgccacggcctccaccacggcctccgccgccacggcc
tttcccgccgcgccctcaggtgccagcctgggcccaggcccgggctcacgccggctgctc
ccaggcagctgcccgcgcctgtccccgcccctgcacgcggcccctggcacgggagagcac
cgcctggcccgccgcgtgcgcagcgacccaggcggaggaggcctggcctttgcctacgcc
tcggggctcggggcgcccccgccgggcctgccgcccaccgaccccgcgggggacgcggcg
gggtcctcctcggcctccagctcctcgtcctcgtcctcctcgtcctcctgctcctcctcc
ggcccgcggcgcaagggcagccgcgactgcgcggtgtgcctggagagcgaggtcatcgcc
gcgctggtgccctgcggccacaacctcttctgcctggagtgcgcgcaccgcatctgccag
cgcagcgagccgcgctgcccggtgtgccatgccgccgtcacgcaggccatccgcatcttc
tcctga
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