Perognathus longimembris pacificus (Pacific pocket mouse): 125368214
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Entry
125368214 CDS
T08928
Symbol
Nsun5
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plop03009
]
125368214 (Nsun5)
Enzymes [BR:
plop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
125368214 (Nsun5)
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
Other ribosome biogenesis factors
125368214 (Nsun5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_fdxn-like
NSUN5_N
Methyltr_RsmB-F
FtsJ
Methyltransf_31
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
125368214
NCBI-ProteinID:
XP_048225016
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All DBs
Position
1:complement(72414569..72419420)
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AA seq
466 aa
AA seq
DB search
MALYATAASVLAGVEERRGSVRSLVYSSGFQNVKPLYALVCETRRFDTVLDAVITRAGLL
RAEKKLRPHLAKVLVYELLLGKGFQGSGGGRWKALLDRHQARLKAELARLKVQRGVSCNE
DLLEAGAKPGSAPQVPRYVRVNTLKTCSDDVVDYFKRKGFFYQGRASSLEDLRTLEGKHF
LLDPLLPELLVFPAQTDLHEHPLYLAGHLLLQDKASCLPAMLLAPPPGSHVIDACAAPGN
KTSHLAAFLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEGDFLAVSPSDPRYAQV
QYILLDPSCSGSGMLSRQLEEPAKAPSQERLRTLAGFQLRALCHALTFPALKRLVYSTCS
LCQEENEDVVQRALEESSGAFRLAPTLPSWPHRGLKTFPGAEHCLRASPEATLTGGFFVA
VIERAEVSSLASHAEALAQLISSPATRRKKRRKTAAGPGQHLLPCS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtacgcgacggcagcctcggtgctggcgggcgtggaggagcgccgaggctcg
gtccggtcgctggtgtactccagcggcttccagaacgtgaagccgttgtatgcgctggtg
tgtgagacgcggcgcttcgacaccgtgctggacgccgtgattacccgcgccggtctgctc
cgtgccgagaagaagctgcggccgcacctagccaaggtgctggtgtatgagctgctgctg
gggaagggcttccaaggcagtgggggaggccgatggaaggccctgctggaccggcaccag
gctcggctgaaggctgaattggcccggctcaaggttcagcggggtgtgagctgcaatgag
gatcttttggaagcaggggccaagcctggctcagccccccaggttccaaggtatgttcgg
gtgaacaccctcaagacctgctctgatgatgtggtagattatttcaagagaaaaggtttc
ttctaccagggccgtgcttccagcctggaggacttacggacgcttgagggaaagcacttt
cttctggatcctttgttgcctgagctgcttgtgtttcccgcccaaacagacctgcatgag
cacccgctgtacctggcgggacacctcctcctgcaagataaggccagctgcctcccagcc
atgctgctggctccacccccaggttcccacgtcatcgatgcctgtgctgcccctggcaac
aaaacaagtcacttggcagctttcctgaagaaccaggggaagatctttgcctttgaccta
gatgccaagcgtctagcatccatggctacgctgctggcccgggctggagtctcttgctgt
gagttagcagagggagacttcctggcagtgtcgccttctgatccacggtatgctcaggtc
cagtacattctactggacccttcctgcagtggctcagggatgttgagccggcagctggag
gagccagcgaaggcacccagccaggagcgcctgcgcaccctggcgggcttccagctgcgc
gccctgtgccacgcactcacgttccctgccctgaagcgcctcgtctactctacctgctcc
ctctgccaagaggagaatgaagatgtagtccaaagagccctggaggagagttcaggggcc
ttcaggctggcgcccaccctaccctcctggccccaccgaggcctcaagacgtttccaggg
gctgagcactgcctccgggcttcccctgaagccacgctcactggtggcttctttgtcgct
gtcattgaacgggcagaggtgtcaagcttggcttcacatgccgaagcactggcacaactc
atttctagcccagctacaagaaggaagaagcggcgaaaaactgcggctggccctggccag
cacctgctgccatgctcatag
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