Perognathus longimembris pacificus (Pacific pocket mouse): 125368235
Help
Entry
125368235 CDS
T08928
Symbol
Lingo1
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125368235 (Lingo1)
Membrane trafficking [BR:
plop04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
125368235 (Lingo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
LRR_5
Ig_3
Ig_2
ig
LRR_9
LRR_6
LRR_Zer-1
LRR_LRWD1
LRRNT
Motif
Other DBs
NCBI-GeneID:
125368235
NCBI-ProteinID:
XP_048225033
LinkDB
All DBs
Position
20:44858829..44863877
Genome browser
AA seq
704 aa
AA seq
DB search
MATPQPGGQAWTAGSHGILATLSLSSPPPSAGGVGILGSWFSVAWVSGHAGPGRWPGHPG
VPHPRSRPATSPAETHACFSRAKRRQVSERMXGGGAPARPAPPLACWQPILLLVLGSALS
GAASGCPPRCECSAPERAVLCHRRRLGGRARGHPTETRLLDLSKNRIKTLSQDEFAGFPH
LEELELNENVVSAVEPGAFNNLQGLRALGLRSNRLKLIPPGVFGGLGNLTRLDISENRIV
ILLDFMFQDLLNLRALEVGDNDLVYISHRAFSGLHSLERLTLERCNLTAVPTEALSHLHG
LAVLRLRHLAIAALRDYSFKRLYRLKVLEVAHWPHLDTMTPNCLYGLNLTSLAVTHCNLT
AVPYLAVRHLVYLRVLNLSHNPIGAIEGSMLHELLRLQELQLVGGQLAVVEPHAFRGLHH
LRVLNVSGNRLTTLEESAFHSVGNLETLILDGNPLACDCRLLWVFRRRWRLNFHRQQPAC
ATPESVQGKEFKDFPDVLPPNHFACRRARIRDRQAQRVSVDEGHTVQFACRADGDPPPAI
LWMSPRKHLVSXKSSGRLTVFPDGTLEVRYAQARDNGTYVCIAANAGGNDSVPAHLHVRG
YAPDWPHRPNKTFAFISNQPGDGDANSTRASVPFPFDIKTLIIATTMGFISFLGVVLFCL
VLALPVSRGKGNTKHNIEIEYVPRKSDAGVPAADAPRKFNMKMI
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaccccagccagggggccaggcctggacggccggctcccacggcatcctcgcc
actctgagcctcagttccccgccgccgtccgcaggcggtgttgggatcttagggagctgg
ttctctgtggcttgggtgtcaggccacgcggggcccggccggtggcctggtcacccaggt
gtcccccaccccaggtcccgtccagccaccagccctgcagaaacccacgcctgcttcagc
cgagctaagaggcgccaggtgagcgagaggatgnncggtgggggtgccccggcgcgcccc
gccccccccctggcctgctggcagcccatcctgctgctggtgctgggctcggcgctgtcg
ggcgcggcgtcgggctgccccccgcgctgcgagtgctctgcgccggagcgggcggtgctg
tgccaccggcggcgcctgggtggccgtgcccgagggcatcccaccgagacgcgcctgctg
gacctgagcaagaaccgcatcaagacgctgagccaggatgagttcgcgggcttcccgcac
ctggaggagctggagctcaacgagaacgtggtgagcgccgtggagcccggcgccttcaac
aacctgcagggcctgcgcgcgctgggcctgcgcagcaaccgcctgaagctcatcccgccc
ggcgtgttcggcgggctgggcaacctcacgcggctggacatcagcgagaaccgcatcgtc
atcctgctcgacttcatgttccaggacctgctgaacctgcgcgcgctcgaggtgggcgac
aacgacctggtgtacatctcgcaccgcgccttcagcggcctgcacagcctggagcggctc
acgctggagcgctgcaacctcaccgccgtgcccaccgaggccctgtcgcacctgcacggc
ctggccgtcctgcgcctgcgccacctggccatcgccgccctccgcgactactccttcaag
cgcctctaccgcctcaaggtcctcgaggtcgcgcactggccccacctggacaccatgacc
cccaactgcctctacggcctcaacctcacctccctggccgtcacccactgcaacctgacg
gccgtcccctacctggcggtgcgccacctggtctacctgcgcgtgctcaacctgtcccac
aaccccatcggcgccatcgagggctccatgctgcacgagctgctgcggctgcaggagctg
cagctggtgggcggccagctggccgtggtggagccgcacgccttccgcggcctgcaccac
ctgcgcgtgctcaacgtgtccggcaaccggctcaccacgctggaggagtcggccttccac
tcggtgggcaacctggagacgctcatcctcgacggcaacccgctggcctgcgactgccgg
ctgctctgggtcttccggcgccgctggcggctcaacttccaccggcagcagcccgcctgc
gccacgcccgagtccgtgcagggcaaggagttcaaggacttccccgacgtgctgccgccc
aaccacttcgcctgccggcgcgcccgcatccgggaccgccaggcccagcgggtgtccgtg
gacgagggccacaccgtgcagttcgcgtgccgggccgacggcgacccgccgcccgccatc
ctgtggatgtcgccgcgcaagcacctggtgtcgngcaagagcagcgggcggctcaccgtg
ttccccgacgggacgctggaggtgcgctacgcgcaggcgcgggacaacggcacctacgtg
tgcatcgccgccaacgcgggcggcaacgactccgtgcccgcgcacctgcacgtgcggggc
tacgcgcccgactggccgcaccggcccaacaagacgttcgccttcatctccaaccagccc
ggcgacggcgacgccaacagcacccgcgccagcgtgcctttccccttcgacatcaagacg
ctcatcatcgccaccaccatgggcttcatctccttcctgggcgtcgtgctcttctgcctg
gtgctcgctcttcctgtgagccgcggcaagggcaacaccaagcacaacatcgagatcgag
tacgtgccgcgcaagtccgacgcgggcgtccccgccgccgacgcgccccgcaagttcaac
atgaagatgatctga
DBGET
integrated database retrieval system
