Perognathus longimembris pacificus (Pacific pocket mouse): 125368364
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Entry
125368364 CDS
T08928
Symbol
Man2c1
Name
(RefSeq) LOW QUALITY PROTEIN: alpha-mannosidase 2C1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
125368364 (Man2c1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125368364 (Man2c1)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
125368364 (Man2c1)
Membrane trafficking [BR:
plop04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
125368364 (Man2c1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Ams1-like_1st
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
125368364
NCBI-ProteinID:
XP_048225263
LinkDB
All DBs
Position
20:complement(44674340..44684927)
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AA seq
1056 aa
AA seq
DB search
MAAAPALKHWRATLERVEKFVSPRYFTDCNLRGRLFGDSCPVAALSSFLTPERLPYHEAI
QRDFRPARVGDSFGPTWWTCWFRVELSIPEAWVGQEVHLCWESDGEGLVWRDGEPVQGLT
KEGEKTSYVLTEKLGDQDPRNLTLHVEVACNALLGAGKGSLIAPPDPDRTFRLSRAELAV
FRRDVHGLLVDLELLLGIAKGLGQDNQRSFQALHTANHMVNACDPARPETFPAARALASR
FFSQRGGESQHTVHATGHCHIDTAWLWPLEETVRKCARSWASAARLMEDNADFIFACSQA
QQLEWVRSRYPGLYARLRECAGRGQFVPVGGTWVEMDGNLPSGEALVRQFLLGQAFFLQE
FGATCSEFWLPDTFGYSAQLPQIMRGCGIARFLTQKLSWSLVNAFPHHTFFWEGLDGSRV
LVHFPPGDSYSMQGSVEEVLKTVTNNRDKGRANHSAFLFGFGDGGGGPTQAMLDRLTRLR
NTDGLPRVRLSSPAQLFSALERDAGQLCTWVGELFLELHNGTYTTHAQLKKGNRECERTL
HDAELLSSLALARRARFLYPAAQLQALWRNLLLNQFHDVLTGSCIQLVAEEALRLYDDIR
SQGAALLGAAAAALSAGEPGPEGVLVVNTLPWPRTEVLSLPRPGGAHSLALVTVPGVGYA
PAPGPAPPPPEQPPVCVVQEADGSVTLDNGLVRVTLDPTGRVASLVLVTSGREAMARGAL
GNQFVVFDDVPLYWXAWDVMDYHLETRRPVPGQAGTLTVGAQGGLRGSAWFVLQLSGDSR
LRQEVVLDMGCPYVRFHTEVHWHEAHKFLKVEFPARVRSPQATYEIQFGHLQRPTHYNTS
WDWARFEVWAHRWVDLSEHGFGLALLNDCKYGASVRGGVLSLSLLRAPKAPDATADMGRH
EFTYALMPHQGTFQEAGVIQAAYSLNFPLLALPVPGPAPAAWSAFSVSSPAVVLETVKQA
EKPQGLALVLRLYEAHGSHVDCWLRSSLPVQEAFACDLLERPDPAGPLPLRDAGLKLSFA
PFQVRSLLLLLRPPPAEAPPSPGRGPRGPAGVPPPT
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgccggctctgaagcactggcgagccacgctggagcgggtggagaagttc
gtgtcgccgcgctacttcaccgactgcaacctccgcggcaggctcttcggcgacagctgc
ccggtggcggcgctctcgagcttcctgacgcccgagagacttccgtaccacgaggcgatc
cagcgggacttccgccccgcgcgggtcggcgacagcttcgggcccacgtggtggacctgc
tggttccgcgtggagctgagcattccagaagcatgggtgggccaggaggttcacctctgc
tgggagagcgatggagagggcctggtgtggcgcgatggcgagcccgtccagggtttgacc
aaagagggtgagaagaccagctacgtcctgacggagaagctgggggaccaggatccccgc
aacctcacgctccacgtggaagtggcctgcaacgcgctgctgggggcggggaagggcagc
ctgatcgcacccccagaccccgacaggaccttccggctgagccgcgccgagctcgccgtg
ttccgccgcgacgtccacgggctcctggtggacctggagctgctgctgggcatcgccaag
ggcctcgggcaggacaaccagcgcagcttccaggccctgcacacggccaaccacatggtg
aacgcgtgcgaccccgcgcggcccgagaccttccccgccgcgcgcgccctggcgtcccgg
ttcttcagccagcgcgggggagagagccagcacacggtgcacgccacggggcactgccac
atcgacacggcctggctgtggccgctggaggagacggtgcgcaagtgcgcgcggagctgg
gcctcggccgcgcggctcatggaggacaacgccgacttcatcttcgcctgctcgcaggcc
cagcagctcgagtgggtgaggagccgctaccccgggctgtacgcgcggctccgggagtgc
gcgggccgcgggcagttcgtgcccgtggggggcacctgggtggagatggacgggaacctg
ccgagcggggaggccctggtgcggcagttcctgctcgggcaggccttcttcctgcaggag
ttcggggccacgtgctcggagttctggctgccggacaccttcgggtactcggcgcagctc
ccccagatcatgcggggctgcggcatcgcgcgcttcctcacccagaagctgagctggagc
ctggtgaacgccttcccgcaccacaccttcttctgggaggggctggacggctctcgggtg
ctggtccactttcccccgggggactcgtacagcatgcagggcagcgtggaggaggtcctg
aagacggtgaccaacaaccgcgacaaggggcgcgccaaccacagcgccttcctcttcggc
ttcggggacgggggcggcggccccacgcaggccatgctggaccgcctgacgcggctgcgc
aacaccgacgggctgcccagggtgcggctctcctccccggcccagctcttctcggccctg
gagcgagacgcggggcagctgtgcacgtgggtcggggagctgttcctggagcttcacaac
ggcacctacaccacccacgcccagctcaagaaggggaaccgggagtgcgagcggaccctg
cacgacgcggagctgctcagcagcctggccctggcccgccgcgcgcgcttcctctacccg
gccgcccagctgcaggcgctgtggaggaacctgctcctcaaccagttccacgacgtgctg
accggaagctgcatccagctggtggccgaggaggccctgcgcctctatgacgacatccgt
tcccagggcgccgcgctgctgggcgcagcggccgcagccctgagcgccggggagccgggc
cccgagggcgtcctcgtggtcaacacgctgccctggccgcgcaccgaggtgctgtcgctg
cccaggcccgggggggcccacagcctcgccctggtgacggtgcccggcgtgggctacgcc
ccggcgcccggacccgccccgccgccgcccgagcagccgcccgtgtgtgtggtgcaggag
gccgacggctcagtgaccctggacaacggcctcgtccgcgtgacgctggatcccacgggc
agagtcgcctccctggtcctggtgacctccggcagggaggccatggcccggggcgccctg
gggaaccagtttgtggtgtttgacgacgtccccctgtactggnacgcgtgggacgtcatg
gactaccacctggagacccggaggcccgtgccgggccaggcggggaccctcacggtgggc
gcgcagggcgggctccgcggcagcgcctggttcgtgctgcagctcagcggggacagccgg
ctgcggcaggaggtcgtgctggacatgggctgcccctacgtccgcttccacaccgaggtg
cactggcacgaggcccacaagttcctgaaggtggagttccccgcgcgcgtgcgcagcccc
caggccacctacgagatccagttcggacacctgcagcggcccacccactacaacacctcc
tgggactgggcccgatttgaggtgtgggcgcaccgctgggtggacctgtcggagcacggc
ttcggcctggcgctgctcaacgactgcaagtacggcgcgtccgtgcggggcggcgtgctc
agcctctcgctcctgcgggccccgaaggcccccgacgccacggcggacatggggcgccac
gagttcacctacgccctgatgccgcaccagggcaccttccaggaagccggtgtcatccaa
gctgcctacagcctcaacttccccctgctggccctgccggtcccggggcccgcgcccgcc
gcctggagcgccttctccgtgtcctcgcccgccgtggtgctggagacggtcaagcaggcc
gagaagccccagggcctcgcgctggtcctgcgtctgtacgaggcccacggcagccacgtg
gactgctggctgcgcagctcgctgcccgtgcaggaggccttcgcctgcgacctcctggag
cggcccgaccccgccggccccctgcccctgcgggacgccggcctgaagctcagcttcgcg
cccttccaagtgcgctccctgctgctgctgctgcggccgccgccggccgaggccccgccg
agtcccgggcgaggcccccgaggccccgccggggtcccgccccccacctga
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