Perognathus longimembris pacificus (Pacific pocket mouse): 125368453
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Entry
125368453 CDS
T08928
Symbol
Chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125368453 (Chd2)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125368453 (Chd2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Myb_DNA-binding
DUF3783
Motif
Other DBs
NCBI-GeneID:
125368453
NCBI-ProteinID:
XP_048225373
LinkDB
All DBs
Position
20:34090970..34194438
Genome browser
AA seq
1832 aa
AA seq
DB search
MARQAGEEFVNLPRCAFTWCHSFLPGGRLSHSASEEASGSDSGSQSESEQGSDPGSGHGS
ESNSSSESSESQSESESESAGSKSQPVLPEAKEKPASKKERIADVKKMWEEYPDVYGVRR
SNRSRQEPSRFNIKEEASSGSESGSPKRRGQRQLKKQEKWKREPSEDEQEQGTSAESEPE
QKRVKARRPVPRRTVPKPSLKKQTKTQRGKRKKQESSDDDDDDDEAPKRQTRRRAAKNVS
YKEDDDFETDSDDLIEMTGEGVDEQQDNSETIEKVLDSRQGKKGATGASTTVYAVEANGD
PSGDFDIEKDEGEIQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQW
LGKVSPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEP
EYLCKWMGLPYSECSWEDEALIGKKFQNCIDSFHSRNNSKTIPTRECKALKQRPRFVALK
KQPSYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQ
LYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNA
LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQN
SLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPA
KVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKAP
EENERENGQEVLLSLVRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKH
YPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNP
QNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVL
ENNSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVST
SATDELLSQFKVANFATMEEEEELEERPHKDWDEIIPEEQRKKVEEEERQKELEEIYMLP
RIRSSTKKAQTNDSDSDTESKRQAQRSSASESETDDSDDDKKPKRRGRPRSVRKDLVEGF
TDTEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQ
LKENASEGKGPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYCLTCR
VKAAHFDVEWGVEDDSRLLLGIYEHGYGNWELIKTDPELNLTDKILPVETDKKPQGKQLQ
NRADYLLKLLRKGLEKKEGVTSGEEAKLKRKPRVKKENKAPRLKDEHGLEFSSPRHSDNP
SEEGEVKDDGLEKSPMKKKQKKKENKENKEKQLSSRKDKEGDKEKKKSKEKKEKPKGDAK
SANKSKRSQGPVHITAGSEPIPIGEDEDDDLDQETFSICKERMRPVKKALKELDKPDKGL
NVQEQLEHTRNCLLKIGDRIAECLKAYSDQEHIKLWRRNLWIFVSKFTEFDAQKLHKLYK
MAHKKRSQEEEEQKKKDDLIGGKKPFRPEASGSSRDSLLSQSHTSHSLHPQKPHMPGSHG
PQMHGHPRDNYSHPNKRHFSNADRGDWQRERKFNYGGNPPWGSDRHHPYDQHWHKDHHYG
DRRHMDAHRSGSYRPNSLSRKRPYDQYSSDRDHRGHRDYYDRHHHDSKRRRSDDFRPQNY
HQQDFRRMSDHRPPMGYHGQGPSDHYRSFHTDKQGDYKPPLPPLPLAASDPRSPPSQKSP
HDSKSPLDHRSPLERSLEQKNNPDYNWNIRKT
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccaggccggggaggagttcgtgaacctaccccggtgcgcgttcacctggtgc
cactccttcctcccgggaggaagactcagtcattcagcctctgaagaagcttcgggttca
gactccggcagccagtcagagagtgaacagggcagcgatccaggaagtgggcatggcagc
gaatcgaacagcagctctgagtcctctgagagccagtcagagtctgagagtgaatcagca
ggttccaaatcccagccagtccttccagaagccaaagagaagccagcatccaagaaggaa
cggatagctgatgtgaagaagatgtgggaagaatatcccgatgtctatggggtcaggagg
tcaaatcgaagcagacaagagccctcacgatttaatatcaaggaagaggcaagtagcggg
tctgagagtgggagcccaaaaagaagaggccagaggcaactgaaaaaacaagaaaaatgg
aaacgggagccttcagaagatgaacaggagcaaggcaccagtgcagagagtgaaccagag
caaaaaagagtgaaagccagaagacctgtccccagaagaacagtgcctaaaccttctctt
aaaaagcaaacgaagactcagcgtgggaaaaggaaaaagcaagagtcttctgatgatgat
gacgatgacgatgaagctcccaagaggcagactcgtcgaagagcagctaaaaacgttagt
tataaagaagatgatgactttgagactgactccgatgatctcattgaaatgacaggagaa
ggggttgatgaacagcaagataacagcgaaactattgaaaaggtcttagattcacgacag
ggaaagaaaggagccactggagcttctactactgtgtatgctgttgaagctaatggagac
cctagtggtgactttgacattgagaaggatgaaggagaaatccagtatctcatcaagtgg
aagggttggtcttacattcacagcacctgggaaagtgaagaatccttacaacaacagaaa
gtgaagggtctaaaaaagctagagaacttcaagaagaaggaagatgaaatcaaacaatgg
ttaggaaaagtgtctcctgaagatgtggaatatttcaattgccaacaagagttagcctca
gagttgaataaacagtatcagatagtagaaagagtaattgctgtgaagacaagtaaatct
acattgggccaaacagattttccagctcatagtcggaagccagcgccttccaatgaacct
gagtatctatgcaaatggatggggctgccctattcagagtgcagctgggaggatgaagcc
ctcattgggaagaagttccagaactgcatcgacagtttccacagtcggaacaactcaaaa
actatcccgacgagagaatgcaaggctctgaagcaaagaccacgatttgtggctttaaag
aaacagccatcatacttaggaggagaaaatctggagctccgagactatcagctagaaggc
ctcaactggctggctcattcctggtgcaaaagtaacagtgtaatccttgctgatgaaatg
ggcctagggaagaccatccagaccatatcattcctctcctacctgttccaccaacaccag
ctgtatggaccctttcttatagtcgtccctttatccaccctcacctcatggcagagggaa
tttgaaatctgggcaccagagattaacgtagtggtttacataggtgacctgatgagcaga
aatacgatacgggaatatgaatggattcattcccaaaccaaaagactgaaattcaatgca
cttataacaacatatgagatcctcttaaaagataagactgtgctgggcagtattaactgg
gccttcctgggagtggatgaagcccatcggttgaagaatgatgactctttattatataaa
actctgattgatttcaagtccaaccataggctcctgattacaggcacccctcttcagaat
tccctcaaggaactctggtccttgctgcactttattatgccggagaagtttgagttctgg
gaagactttgaagaagaccatgggaaggggagggagaatggctaccagagtcttcataag
gtgctagagccgttccttctccggagagtcaagaaagatgtggagaaatctctgcctgcc
aaagtggagcagattctcagagtagagatgtcggctcttcagaagcagtattacaaatgg
attctaactaggaattacaaagctcttgccaaaggaacgagaggtagcacctctggtttc
ctcaacattgtgatggaattgaagaagtgctgcaaccactgctacctgattaaggcccca
gaagagaatgaaagggagaatgggcaggaagttcttctgtctctggtccggagcagcggg
aagctgattctgttagacaaactgctaacaagacttcgagaaagggggaaccgtgtcctt
atcttctcccagatggtgaggatgctggacatcctggcagagtacctgactatcaagcat
tacccattccagcgtctggatggttccatcaagggagaaatccgaaagcaggcattggat
cactttaatgcagatggctctgaggacttctgtttcctgctctccacaagggctggtggc
ctgggaatcaatttggcttctgcagacacagtcgtcatctttgactctgattggaacccc
cagaacgacttgcaggcacaagcccgagcccatcgaattggccagaagaagcaggtaaat
atttatcgcttagtcacaaaagggactgtggaagaggagatcatagaacgggccaagaag
aagatggttttggaccatctggtgattcagcgcatggataccactggccgcacagtcctg
gaaaacaattcaggaagatctaactcaaatccttttaataaagaagaactgactgctatt
ttgaaatttggagcagaggatctcttcaaagaacttgaaggggaggagtcagaacctcag
gagatggatatagatgaaattttacgtttggctgaaaccagagagaatgaagtatccaca
agtgcgacagatgagcttctgtcacagtttaaggttgcgaattttgcaacgatggaagag
gaggaggagctggaagagcgtcctcataaggactgggatgagatcattccagaagagcaa
aggaagaaagtagaggaggaggagcggcagaaagaactggaagaaatttatatgctgcct
cggattcgtagctccaccaaaaaggctcagacaaatgatagtgattctgacactgagtct
aagaggcaggcccagagatcttctgcttctgagagtgagacagatgactctgatgatgat
aagaagccaaagcgccgagggcgcccacggagcgtgaggaaagacctcgtggagggattt
actgacacggagatccgcaggtttatcaaagcttataagaagtttgggctccctctagaa
cggctggagtgcatagcacgtgatgctgagttggtggataagtctgtagcagacctgaag
cgcctgggcgagttgatccacaatagctgtgtgtcagcaatgcaggaatatgaggaacag
ttgaaggagaacgccagcgaggggaaaggaccagggaaaaggagaggccccaccatcaag
atatctggagttcaggttaatgtgaaatccattatccaacatgaagaagagtttgagatg
ctgcataaatctatccctgtggaccctgaagaaaaaaaaaaatactgcttaacctgccgt
gtcaaagctgcacacttcgatgtggaatggggcgtggaggatgactcacgcctgctgctg
ggaatttatgaacatggctatgggaactgggagttaattaaaacggatccagagctgaat
ctgactgacaaaattctacctgtggagacagacaagaagcctcaggggaagcagttacag
aacagagctgactacctgcttaagctgctcaggaagggcctggagaagaaggagggcgtg
accagtggggaagaggccaaattaaagcgaaagcctagagtaaagaaggaaaacaaagcg
cctaggctgaaagatgagcatggacttgaattttcatctcctcgtcactcagacaaccca
tctgaagagggagaggtaaaggatgatggcttagagaaaagtccaatgaaaaaaaagcag
aagaagaaagagaacaaggagaacaaggagaaacagctgagctcgaggaaagacaaagaa
ggggacaaagagaagaagaagtcgaaagagaagaaagagaagcctaaaggtgatgccaaa
tctgcaaataaatcaaagcgatctcagggtcctgtccacatcacagcaggaagtgagcct
atccccattggagaggacgaggatgatgatctggaccaagagacctttagcatctgtaag
gagagaatgaggcccgtgaaaaaggcactgaaagagctggataaacctgacaagggactc
aatgtgcaggagcagctggaacacacccggaactgcctgctcaaaattggagaccggata
gccgagtgccttaaagcttactcagaccaggagcacatcaaactatggaggaggaaccta
tggatttttgtttccaagtttacagaatttgatgctcaaaaactccataagctatacaag
atggctcataagaaaagatctcaagaggaggaggagcaaaaaaagaaagatgacttgatt
ggtgggaagaaaccgtttcgcccagaggcctcgggctcaagccgggattctctgctgtct
cagtctcacacctcacacagccttcaccctcagaagcctcatatgcctggctctcatggc
ccacagatgcacggacacccaagagacaactatagtcaccccaacaagaggcactttagt
aatgcagaccgaggagactggcagagggaaaggaagttcaactacggcggcaacccaccc
tggggcagtgaccggcaccatccgtacgatcagcactggcacaaggaccaccattacggg
gaccggcggcacatggacgcccaccgttcaggaagctaccgccccaacagcttgtccaga
aagcggccgtatgaccagtacagcagcgaccgagaccaccggggccacagagattactat
gacaggcaccaccatgactccaagcggaggagatctgatgacttcaggcctcagaactat
caccagcaggatttccggcgcatgtctgatcaccgcccccccatgggttaccatggccag
ggaccctcagaccactaccgctccttccacacagacaagcagggggattacaagccgccg
ctgccccctctgcccctggcagcctcggatccccgctcgcccccttctcagaaatctcct
cacgactccaagtcacccctggatcacaggtctcctctggagcggtccctagaacagaaa
aacaacccagattataactggaacattcggaaaacatag
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integrated database retrieval system
