Perognathus longimembris pacificus (Pacific pocket mouse): 125368455
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Entry
125368455 CDS
T08928
Symbol
Gtf2ird1
Name
(RefSeq) general transcription factor II-I repeat domain-containing protein 1 isoform X1
KO
K27274
general transcription factor II-I repeat domain-containing protein 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plop03021
]
125368455 (Gtf2ird1)
Transcription machinery [BR:
plop03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
125368455 (Gtf2ird1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GTF2I
SR-25
CCDC106
Motif
Other DBs
NCBI-GeneID:
125368455
NCBI-ProteinID:
XP_048225388
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Position
1:72971953..73013119
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AA seq
956 aa
AA seq
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MALLGKRCDIAANGCGDRWSSAFARKDEIISSLVSALDSMCSALSKLNAEVACVAVRDDS
AFVVGTDKGRMFLNARKELQADFLRFCRGPPWRDPEADHPKKAARGEGSGRGARASLEVG
ADVYLLQKMVEEVFDVLYSEALGRASVEPLPYERLLREPGLLAVQGLPEGLAFRRPAEYD
PKALMAILEHSHRIRFKLKRPLDDGGRDSKALVEINGLSLLPKGARDCGLHGQAPQAVLQ
DPPPPSTSSGAGFLYSSALPSHALRDLKQEAPGPLLPSELGLGWAGPEHKAPAAHDADCY
GQKPPGPAGPQIQNVHASKRILFSIVHDKTEKWDAFLKDTEDINTLRECVQILFNSRYAE
ALGLDHMVPVPYRKIACDPEAVEIVGIPDKIPFKRPCTYGVPKLKRILEERHSIHFVIKR
MFDERIFTGNKCTKDVPKLEPPSPPEDGAAGFRLDPGSSSPADCGPGTSGELGILRPIKI
EPEDLDIIQVTVPDPSPSPELMGDFLPGHLPSEDSGCGMEVLADKGPSEDPRPEERPVED
SPGDAIRPLRKQVELLFNTRYAKAIGMSEPVKVPYSKFLMYPDELFVVGLPDGISLRRPN
CFGIAKLRKILEASNSIQFVIKRPELLAEGVKEPVLDSQERESGAPRVDSRLGRQALQEN
YDTRLSRIDIANTLREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVVIEGLPPGIP
FRKPCTFGSQNLERILAVADKIKFTVTRPFQGLIPKPDEDDANRLGEKVILREQVKELFN
ERYGEALGLNRPVLVPYKLIRDSPDAVEVMGLPDDIPFRNPNTYDIHRLEKILKAREHVR
MVVVNQLQPFAEVCKDAKVPAKDSSVPKRKRKRVSEGNSASSSSSSSSSSSSSSSSSSSN
AESVASTNQISLVGAHRVGRTRGLRAKSQPDDLRQWPMYMVDYTGLNVQLPGPLNY
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggccctcctggggaagcgctgtgacatcgctgccaacggctgcggtgaccgctggagc
tccgccttcgcccgcaaagacgagatcatcagcagcctggtgtctgccctggactccatg
tgctccgcgctgtccaagctcaacgccgaggtggcctgcgtggctgtccgagatgacagc
gccttcgtggtgggcacggacaaggggagaatgttcctgaacgccaggaaggagctgcag
gcagacttcctgcgcttctgccggggacccccgtggagggatccagaagctgatcaccct
aagaaggcggcgcggggcgagggcagtggccgcggggcgcgggcctcgctggaggtgggc
gcagacgtgtacctgctgcagaagatggtggaggaggtgtttgacgttctttatagcgaa
gcgctgggcagggccagcgtggagcctctgccgtacgagaggctgctcagggagccgggg
ctgctggctgtgcaggggctgccggagggcctggccttccggaggccggcggagtacgac
cccaaggccctcatggccatcttggaacacagccaccgcatccgcttcaagctcaagagg
cctctggatgatggtgggcgcgactcgaaggccctggtggagatcaatggcctctccctg
ctccccaagggggcccgggactgtggcctgcacggtcaggccccccaggccgtgctccag
gacccgccgccccccagcacctcctctggggcaggcttcctctacagcagcgccctgccc
agccacgccctccgcgacctgaagcaggaggcacccggcccgctgctgccctcggagctg
ggcctgggctgggccggccccgagcacaaggcgcccgcggcccacgacgcagattgctat
ggacagaagccgccaggacctgcagggcctcaaatccagaacgttcatgcctccaagcgc
attctcttctccatcgtccacgacaagacagagaaatgggacgccttcctgaaggacaca
gaggacatcaacacgctgagggagtgcgtgcagatcctcttcaacagcagatatgcggaa
gccctgggcctggaccacatggtacctgtcccctaccggaaaattgcctgcgaccccgag
gccgtggagatcgtgggcatcccggacaagatccctttcaagcggccctgcacgtatggg
gtccccaagctgaagcggatcctggaggagaggcacagcatccactttgtcattaagagg
atgtttgatgagcggattttcacagggaacaagtgtaccaaagatgtccccaagctggag
ccgcccagcccgcccgaggatggtgccgcgggcttcaggttggacccgggcagcagctcc
cctgcggactgcgggccaggaacctctggggagctaggcatcctgaggccgatcaaaatt
gagccagaagacctggacatcattcaggtcaccgtcccagacccttcaccaagcccagag
ttgatgggtgacttccttcccggccatctgccctccgaggactcgggctgcgggatggag
gtgctggcggacaaaggccccagcgaggacccgcgccccgaagagagacccgtggaggac
agcccgggtgacgccatccggcccctgaggaagcaggtggagctgctgttcaacacgcgc
tacgccaaggccatcggcatgtcggagccggtgaaggtgccctactccaagttcctcatg
taccccgacgagctgttcgtggtggggctgcccgacggcatctcactccgcaggcccaac
tgcttcgggatcgccaagctgcggaagattctagaagccagcaacagcatccagttcgtc
atcaagaggcccgagctgctggctgagggtgtcaaggagccagtcctggacagtcaagag
agggagtccggggcccctcgggtggactcgcgcctcgggagacaggcgctccaagagaat
tatgacacgaggctctcccgcatcgacatcgccaacacgctgcgggagcaggtgcaggac
ctgttcaacaagaagtacggggaggccttgggcatcaagtaccccgtgcaggtgccttac
aagcgcatcaagagcaaccctggctcggtggtcatagaggggctgccccccgggattccc
ttccgcaagccctgcaccttcggctcccagaacctagagcgcatcctggccgtggccgac
aagatcaagttcaccgtcaccaggccgttccaaggtctcatcccaaagcctgatgaggac
gatgccaacaggctcggggagaaggtgatcctccgtgagcaggtgaaggagctcttcaat
gagagatacggtgaggccctgggcctgaaccggcccgtgctggtcccatacaagctgatc
cgtgacagcccagatgcggtagaggtcatgggcctgcccgacgacatccccttccggaac
cccaacacctatgacattcaccggctggagaagatcctgaaggcacgggagcacgtgcgc
atggtggtcgtcaaccagctccagccttttgcagaagtctgcaaagacgccaaggtgcca
gccaaagatagcagcgttcccaagcgcaagcgcaagcgcgtgtcggaagggaactcagcc
tcctcgtcctcctcgtcctcatcctcttcctcctcctcctcctcatcgtcctcctccaac
gcagagtccgtggcgtccaccaaccagatctccctcgtgggtgctcacagagtgggcagg
acccggggtctgcgcgccaagtctcagcctgatgacctgaggcagtggccgatgtacatg
gtggactacactggactcaacgtgcagctcccaggacccctgaattactga
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