Perognathus longimembris pacificus (Pacific pocket mouse): 125368468
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Entry
125368468 CDS
T08928
Symbol
Psma4
Name
(RefSeq) proteasome subunit alpha type-4
KO
K02728
20S proteasome subunit alpha 3 [EC:
3.4.25.1
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03050
Proteasome
plop05010
Alzheimer disease
plop05012
Parkinson disease
plop05014
Amyotrophic lateral sclerosis
plop05016
Huntington disease
plop05017
Spinocerebellar ataxia
plop05020
Prion disease
plop05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
125368468 (Psma4)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
125368468 (Psma4)
05012 Parkinson disease
125368468 (Psma4)
05014 Amyotrophic lateral sclerosis
125368468 (Psma4)
05016 Huntington disease
125368468 (Psma4)
05017 Spinocerebellar ataxia
125368468 (Psma4)
05020 Prion disease
125368468 (Psma4)
05022 Pathways of neurodegeneration - multiple diseases
125368468 (Psma4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plop01002
]
125368468 (Psma4)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
plop03051
]
125368468 (Psma4)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
125368468 (Psma4)
Peptidases and inhibitors [BR:
plop01002
]
Threonine peptidases
Family T1: proteasome family
125368468 (Psma4)
Proteasome [BR:
plop03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
125368468 (Psma4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
TRP_N
Phenol_monoox
Motif
Other DBs
NCBI-GeneID:
125368468
NCBI-ProteinID:
XP_048225408
LinkDB
All DBs
Position
20:complement(45588052..45599326)
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AA seq
265 aa
AA seq
DB search
MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF
FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQA
YTQFGGKRPSASSFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLK
QDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIATLTREHGKTVIRVLKQKEVEQL
IKKHEEEEAKAEREKKEKEQKEKDK
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcagatatgactccaggaccactatattttctccagaaggccgcctgtaccag
gtggagtacgccatggaggccatcgggcacgccggcacctgcctggggattttggcaaac
gacggcgttctgctggctgccgagaggcgcaacatccacaagcttctcgacgaggtcttc
ttctctgagaagatttacaagctcaatgaggacatggcctgcagtgtggccggcatcacc
tcagacgccaacgtcctcaccaacgagctgaggctcatcgcgcagaggtatctgttacag
tatcaagagccgattccttgcgagcagctggtcacggccctgtgtgacatcaagcaggcc
tacacacagttcggaggcaagcgtccttcggcgtcgtccttcggcgtgtcactgctctac
atcggctgggacaagcactatggcttccagctgtaccagagcgaccccagcgggaactac
gggggttggaaggccacgtgcatcggcaacaacagcgccgccgccgtgtcgatgttgaag
caagactacaaagagggggagatgaccctgaagtcggcccttgctctggccatcaaagtg
ctcaataagaccatggatgttagtaagctgtccgccgaaaaagtggaaatcgccacgctc
acgagggagcatgggaagacagtgatccgcgtgctcaagcaaaaggaggtggagcagctg
atcaaaaaacacgaggaggaggaggccaaagccgagcgggagaagaaggagaaggagcag
aaggagaaggacaagtag
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integrated database retrieval system
