Perognathus longimembris pacificus (Pacific pocket mouse): 125368540
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Entry
125368540 CDS
T08928
Symbol
Cpt1c
Name
(RefSeq) carnitine O-palmitoyltransferase 1, brain isoform
KO
K19524
carnitine O-palmitoyltransferase 1, brain isoform [EC:
2.3.1.21
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00071
Fatty acid degradation
plop01212
Fatty acid metabolism
plop03320
PPAR signaling pathway
plop04148
Efferocytosis
plop04152
AMPK signaling pathway
plop04714
Thermogenesis
plop04920
Adipocytokine signaling pathway
plop04922
Glucagon signaling pathway
plop04936
Alcoholic liver disease
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
125368540 (Cpt1c)
09130 Environmental Information Processing
09132 Signal transduction
04152 AMPK signaling pathway
125368540 (Cpt1c)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125368540 (Cpt1c)
09150 Organismal Systems
09152 Endocrine system
04922 Glucagon signaling pathway
125368540 (Cpt1c)
04920 Adipocytokine signaling pathway
125368540 (Cpt1c)
03320 PPAR signaling pathway
125368540 (Cpt1c)
09159 Environmental adaptation
04714 Thermogenesis
125368540 (Cpt1c)
09160 Human Diseases
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
125368540 (Cpt1c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
plop03029
]
125368540 (Cpt1c)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
125368540 (Cpt1c)
Mitochondrial biogenesis [BR:
plop03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
125368540 (Cpt1c)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
Motif
Other DBs
NCBI-GeneID:
125368540
NCBI-ProteinID:
XP_048185240
LinkDB
All DBs
Position
20:23458492..23472475
Genome browser
AA seq
799 aa
AA seq
DB search
MAEARQAADFPPWLPSGGAPEGLRGSLLQEIYLCSLRSWRRHLGRFWNDFLTGIFPASPL
SWLFLFSAIQLAWFLQLDPSLGLVEKIKDFLPDWGGQHHYLRGVLAAALFASCLWGALIF
TLHVALRLLLSYHGWLLEPHGSMSSPTKTWLALVRIFSGRHPMLFSYQRSLPRQPVPSVQ
DTVSKYLESVRPVLSDEDFDWMAVMAQEFLKLQASLLQWYLWLKSWWASNYVTDWWEEFV
YLRSRNSLMVNSNYYLMDFLYVTPTPLQAARAGNAVHALLLYRHRLTRQEIPPTLLMGMR
PLCSAQFEKIFNTTRVPGVEKDSLRHLRDSWHVAVFHRGRFFRVGTHSPKGLLSPRSLEQ
QFQRILDDCSPACPHEEHLAALTAAPRGMWAQVRESMKARAAAALEAVEGAAFFVSLDSE
PGGLTREDPAASLDAYAHTLLAGHGHDRWLDKSFTLIVFSNGKLGLSVEHSWADCPISGH
MWEFTLATECFHLGYSADGHCKGQPDPTLPQPQRLQWDLPDQVHSSISLALRGAKTLAGN
IDCHVFPFSHFGKSFIKHCHLSSDSFIQVVLQLAYFRDRGRFCLTYESAMTRLFLEGGTE
TVRSCTREACNFVKAMEDKEKTDSQCLTLFRLAVDKHQTLLKAAMIGQGIDRHLFALYIV
SQFLNLQSPFLSQVHSEQWQLSTSQIPVQQAHLFDVHNYPDYVSSGGGFGPADDNGYGVS
YIFMGDDTVTFHIASKKSSTKTDSHRLGQHIEDALLDVAALFQTRQHLKHRFRRAGEECS
GYRQRFPSRKTAPTAPTEL
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcgcgccaggctgctgatttcccaccgtggctgccctcgggcggagcacca
gagggtctccgtggctccctgctgcaggagatctacctgtgcagcctgcgatcttggaga
aggcacctggggcgattctggaatgactttctgactggtatattccccgccagccccctc
agctggctcttcctcttcagtgcaatccagcttgcctggttcctccagctggatccttcc
ctaggcctggtggagaagattaaagatttcctgccagattggggtgggcagcaccactac
ctccggggggtcctggcagctgctctgtttgcctcttgtttgtggggtgccttgatcttc
acccttcacgtggccctgaggctgctcctgtcctaccatggctggcttcttgaaccgcac
ggatccatgtcctcacctaccaagacctggctggccctggtccgcatcttctccggccgc
cacccaatgctcttcagttaccagcgctccctgccacgccagccggtaccctcggtgcag
gacaccgtgtccaagtacctggagtcagtccgccccgtcctctccgatgaggacttcgac
tggatggcggtgatggcacaggagttcctgaagctgcaggcatcgctgctgcagtggtac
ctgtggctgaagtcttggtgggcgtctaattacgtcactgactggtgggaagagtttgtg
tacctgcggtctcgcaactcactgatggtgaacagcaactactatttaatggacttcctg
tacgtcacacccacgccgctgcaggcagctcgggcggggaacgccgtccatgccctcctc
ctgtaccgccaccggctgacccgccaggagatcccaccgactttgcttatggggatgcgt
cctttgtgctctgcccagttcgagaagatattcaacactacccgggtgccaggggtggaa
aaagactccctccgccacctccgggacagctggcacgtggctgtcttccaccggggccga
ttcttccgtgtggggacccattcccctaaaggcttgctgtccccacggtcgctggaacag
caattccagcgcatcctggacgactgctcacccgcctgtccccacgaggagcacctggca
gccctcacagccgctcccaggggtatgtgggcccaggtgcgagagtccatgaaggcccgg
gctgccgctgctctggaagccgtggaaggagccgcgttctttgtgtctctggattcggag
ccaggaggcctcaccagggaggacccagctgcttccctcgatgcttatgcccacaccctg
ctggccggccacggtcatgaccgctggcttgacaagtccttcaccctcattgtcttctcc
aatgggaagctgggcctcagcgtggagcactcatgggctgactgccccatctcaggacac
atgtgggagttcaccctggccaccgaatgctttcatctgggctactcggcagatggccac
tgcaagggacagcctgatcctacgctgccccagcctcagcggctacagtgggacctccca
gaccaagtccattcctccatctctctagccctgaggggagccaagaccttggctggaaac
atcgattgccatgtattccccttctcgcactttggcaagagcttcatcaaacattgccac
ctctcttcagacagtttcatccaggtggtcctgcagctggcctacttccgggacaggggt
cgattctgcctgacttatgagtcagccatgactcgcttgttcctggaaggtgggacggag
acagtgaggtcttgtaccagggaagcttgtaactttgtgaaagcgatggaggacaaggag
aagacagactcacagtgcctcaccctgttccgcctggctgtggataaacaccagactctg
ctcaaggcagccatgattgggcaggggatcgaccggcacctctttgcactctacattgtc
tcacaattcctcaatctgcagtcgcccttcctatctcaggttcactcggagcagtggcag
ctgtccaccagccagatccccgtgcagcaggcacacctgtttgatgtccacaattacccg
gattatgtttcctcgggtggcggattcgggcctgctgatgacaacggctatggcgtttct
tatatcttcatgggggatgacacggtgaccttccacatcgccagtaagaagtcaagcaca
aaaacagactcacaccggctgggccagcacattgaggatgcccttctggacgtggccgcc
ctattccagacgcggcagcatcttaagcacagattccgaagggctggagaagagtgctcc
gggtacaggcagagatttccctccagaaagactgctcccacagcacctactgaactctga
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