Pleurocapsa sp. PCC 7327: Ple7327_0388
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Entry
Ple7327_0388 CDS
T02367
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
plp
Pleurocapsa sp. PCC 7327
Brite
KEGG Orthology (KO) [BR:
plp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plp03016
]
Ple7327_0388
Enzymes [BR:
plp01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
Ple7327_0388
Transfer RNA biogenesis [BR:
plp03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Ple7327_0388
Prokaryotic type
tRNA splicing ligases
Ple7327_0388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AFY75848
LinkDB
All DBs
Position
426566..428017
Genome browser
AA seq
483 aa
AA seq
DB search
MITKQDFRRINDYIWEIPTSFHPQMKVPVWVFADEELLEDALGDLSITQAVNVACLPGLV
GHVAIMPDVHQGYGMPIGGVMASLVPGGIISPGAVGYDINCGVRVLASPIDYQSAKPYLS
DLASTLYRNCPSGVGEKGSIPLTTEELDNVCRKGARWALEHGYALEEDLPRTEEFGCLEG
ADPSKASKRAKERGRGQLGTLGAGNHFLEVDVIEEIYDREAAEIMGLHKGCLALQIHCGS
RGFGHQICTDYVQDFQWAVINYGIQLPDRELVCAPIDSTEGQAYLAAMKAAANYAFANRQ
TLAYHARRSFKEIFGSQAGENPLRQVYDIAHNMAKIEKHRIEGKDMTVCVHRKGATRAFG
PGFAGLPSEYRPIGQPVLVPGSMGTESWILLGTNTNEELSFGSTCHGAGRVMSRHKAKRE
IRGDLLRQELENEGISVRAGSMPGLAEEAPKAYKDVSRVVEAVSKAGIAHKVARLHPIAV
VKG
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgattaccaaacaggattttcgtcgaattaacgattacatttgggaaattcctacctcc
tttcatccgcaaatgaaagttcccgtttgggtgttcgccgatgaggaacttctagaggat
gccttaggggatttatccattacccaagcagtcaatgttgcctgcttgcccggtttagtc
ggtcatgtcgccattatgcccgacgtgcaccagggctatggcatgccgattggcggcgtg
atggcctctcttgtacccggaggcattatttctcctggggcagttggatacgatatcaac
tgcggcgttcgcgttttagcctcgcccatcgactatcaaagcgccaaaccctatttgagc
gacttagcaagcactctctaccgcaactgccccagtggagttggcgaaaagggaagcatc
cctcttacgacagaagaattagacaacgtatgtcgaaagggcgctcgctgggcgctagag
catggctatgcccttgaagaagacttaccgcgcaccgaggaatttggctgcttagaagga
gccgatcccagcaaggcgagcaaacgcgctaaagaacgcggtagaggtcaattaggtacg
ctgggagcgggtaatcactttctagaagtcgatgtcatcgaggaaatctacgatcgcgaa
gcggctgaaatcatgggattgcacaaaggatgtctcgccttgcaaattcactgcggttct
cgcggtttcggacaccaaatttgtaccgattacgtccaagattttcaatgggcagtcatc
aactacggcatccaactacccgatcgcgaattggtctgcgcgcccatcgattcaaccgaa
ggacaagcctatctagcggcaatgaaagcggctgccaactatgcgtttgccaaccgtcaa
acgttggcatatcacgctcggcgcagtttcaaagagatattcggttcgcaagccggagaa
aatcccctgcgccaagtctacgatatcgcccataatatggcgaagatagaaaaacaccgc
attgaagggaaagatatgaccgtctgcgtccaccgcaagggtgcaacgcgggcgtttggt
cctggatttgcaggactgccaagcgagtatcgccctatcggtcaacccgttctcgtaccc
ggttcgatgggaacggagagttggattttgttgggaacgaacaccaatgaagaattgtct
ttcggttctacctgtcacggtgcaggacgggtgatgagccgccataaagcaaaaagggaa
attcggggcgatctcttacggcaagagttagaaaatgaaggaatcagcgttcgcgcgggt
tcgatgccgggacttgccgaagaagcgcccaaggcatacaaagatgtcagccgcgttgtg
gaagcggttagcaaagctggcatcgctcataaagtagctcgtctgcatcccattgccgta
gtaaaaggataa
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