Pleurocapsa sp. PCC 7327: Ple7327_2580
Help
Entry
Ple7327_2580 CDS
T02367
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
plp
Pleurocapsa sp. PCC 7327
Brite
KEGG Orthology (KO) [BR:
plp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plp03400
]
Ple7327_2580
DNA repair and recombination proteins [BR:
plp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Ple7327_2580
Archaeal homologous recombinant proteins
Ple7327_2580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
AAA_27
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
Rad50_zn_hook
Seryl_tRNA_N
ABC_tran
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AFY77865
UniProt:
K9T5R3
LinkDB
All DBs
Position
2795019..2798042
Genome browser
AA seq
1007 aa
AA seq
DB search
MIPLQLTLKNFLSYREATLDFRGLHTACICGANGAGKSSLLEAITWVIWGQSRAASDDDI
IHAGAEYVRVDFQFSSNSQIYRIIRTRNRGRNSSLEFQIENGGDFRSVTAKSLRATQEQI
ISYLKLDYDTFINSAYLRQGRADEFMLRRPNERKQILADLLKLDRYEELAEQAKDISKQF
KGQAEQLELSLQPIEKQLEQRDTVVSQLTNLEKELIKFQLAQESDREKLLQLQAGEHQRQ
SWYQQLSWQQTQYQNLLQDCERLKTEQIELKNQIAELERFLDREPEIVAEYQQLLSLQQE
EETLSLKFQAYQDAQQHRQELEQQLIQQTNELNLQIRQGQTRLESLQQQEQELQQILSRS
AEIQAGLEQLRHHRQRLRELDDLQHQVSPLLQRRYTLQTDIERAQARLTAQLEQLRSSEA
QYLEELAKVPEIRQAALAVDAKIQELEKKQVYQKRIEEKGQERKSYKERLQTNQKICEEQ
LEELKEKLKLLQIPNAVCPLCEQDLDEHYRHNVIYKTQTQQQEIQEQIWSFQEQITAYER
ELQNLRIEYQQLKEELTPYTSLQQQFGQLEAQLEAISEVNSKLKQVRGEIARVEYLLSSK
LYAQDLQTELQLLNQEIQRLNYDEQTHALVRGEVEKWRWAEIKQAKLDDASRRQSAIDAK
KPKLVAQIERLQTQLEQLRTSSEIQKQIERLERYLTELGYERSRHQNLINSLRQAQPWQL
RYQELKQAKQQYPQLQNRLQQLEQLLQVRLGDRVTMKEQLDSLIAQMEKTTDCREEIQAL
EAKIQQQQRQIDEFLAQQGRWKQTLTQLENLQIQYEENCKQLKEVKKQYRIYQELAQAFG
KNGIQTLMIENILPQLEAETNQILARLTGNQLHVQFLTQKAGRSVSKRKNSKLIDTLDIL
IADARGTRAYETYSGGEAFRINFSIRLALARLLAQRAGTALQMLIVDEGFGTQDSEGCDR
LIAAINAIAADFACILTVTHMPQFKEAFQHRIEVRKTERGSQLILSN
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgattccgctacaactgacgctcaaaaactttctcagttaccgggaagcaaccctagat
tttcggggactacatactgcctgcatatgtggagctaatggcgcgggaaaatcttcttta
ctagaagcaattacttgggtaatttggggtcaaagtcgggctgctagcgatgatgacatc
attcatgcaggggcggaatacgtgcgagtcgattttcaatttagtagcaatagtcaaatc
tatcgcattattcgcactcgcaatcggggacgaaatagttccttagagtttcagatagaa
aatggaggagatttccgttctgtcactgccaaaagtttgcgagcaactcaagaacaaatt
atttcttatttaaaactcgattatgatacctttattaattcagcttacttacgtcaggga
cgagccgatgaatttatgttgcgccgtcccaacgaacgcaagcaaattttagccgattta
ctcaaactggatcgctatgaagaattagccgagcaagctaaagatatatcgaaacaattt
aaggggcaagcggaacaattagaattaagtttacaaccaatagaaaaacaattagaacag
agagatacggttgtttctcagctgactaatttagaaaaggagttaataaaatttcaacta
gcgcaagaaagcgatcgcgagaaattacttcaattacaagcaggagaacatcagcgacaa
agttggtatcaacaacttagttggcaacaaactcaatatcaaaatttattgcaagactgc
gagcggctaaaaaccgaacaaatcgaactaaaaaatcagattgccgaactagaaagattt
ctcgatcgagagccagaaattgttgccgaataccaacaattactaagcttgcaacaagaa
gaagaaaccttgtctttaaagtttcaagcctaccaagacgcacaacaacacagacaagaa
ctcgaacaacaactgattcaacaaactaacgaactaaatttacaaattcgacagggacaa
acccgtttagaatccctacaacaacaagaacaagaactgcaacaaattttatctcgttct
gctgaaatccaagcagggttagaacaacttcgccaccatcgccaacgtctaagagaactt
gacgacttacaacatcaagtttcccctttattgcagagacgctacactctacaaaccgat
atcgaacgcgcgcaggcaagactgacagcacaattagaacaactccgttcttccgaagca
cagtatctagaagaattggctaaagttccagaaatacgtcaagctgcgctagcagtagat
gccaaaattcaagaattagaaaaaaaacaagtttatcagaagcgcattgaagaaaaagga
caagaaagaaagagttataaagagcgattgcaaaccaatcaaaaaatttgtgaagaacaa
ttagaagaattaaaagaaaagctaaagctcctgcaaattcctaatgcagtttgtccgcta
tgcgaacaggatttagacgaacattatcgtcataatgttatttataaaactcaaactcaa
cagcaagaaatccaagaacaaatctggagttttcaggaacaaattactgcctatgaaaga
gaattacaaaatttacgaattgaatatcaacaattgaaggaagaattaactccttatact
tctctacagcagcaattcggacagctagaagcacagttagaagctattagtgaagttaat
agtaagcttaagcaagttcgaggagaaatcgcacgagttgaatatttattatcaagcaaa
ctatatgctcaagatttacagacagaattgcaattactcaatcaggaaatacaacgtctc
aattatgacgaacaaacccatgctctagtcagaggggaagttgaaaaatggcgatgggca
gaaattaaacaagctaagctggatgatgccagtcgccgtcaaagtgctatcgatgcaaaa
aaacccaaacttgtcgctcaaatagagcgcttgcaaactcagttagaacagttgcgaacc
agttccgaaattcaaaaacaaattgagcgattggaacgatatcttactgaattgggttac
gagcgatcgcgccatcaaaacctaatcaattctctgcgccaagcgcaaccttggcaattg
cgctatcaagaattaaaacaagcaaaacaacagtatccccaattgcaaaatcgcctccaa
caactagaacaacttctacaagtaagattgggcgatcgcgtgacgatgaaagaacaatta
gatagcctaattgctcaaatggaaaaaaccaccgattgtcgagaagaaattcaagcccta
gaagcaaaaattcaacagcaacagcgacaaattgacgaatttttagcccagcagggacgt
tggaaacaaacgttaactcaattagaaaacttgcaaattcaatacgaggaaaactgcaaa
caattaaaagaagtcaaaaaacaatatcgaatctatcaagaattagcgcaggcatttggg
aaaaatggtattcaaacgctaatgattgaaaatattttacctcagttagaggcagaaacc
aatcaaattttagcgcgattgacaggcaatcaattgcacgtacaatttttaacgcaaaag
gcgggacgcagcgtttctaagaggaaaaattctaaattaatcgatacattagatatttta
attgctgatgctagaggaactcgtgcctacgaaacctattcgggcggagaagcatttcgg
attaatttttctattcgtttagctttggcgagattattagctcagcgtgcaggaactgcc
ttacaaatgttaattgtcgatgaaggttttgggacgcaagatagtgaaggatgcgaccga
ttaattgctgcaattaatgcgatcgctgccgattttgcctgtattctaaccgtcactcac
atgcctcaatttaaagaggcttttcagcatcgcatcgaagttcgcaaaaccgagcgaggt
tctcagttaattttgtcaaattaa
DBGET
integrated database retrieval system
