Pleurocapsa sp. PCC 7327: Ple7327_3637
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Entry
Ple7327_3637 CDS
T02367
Name
(GenBank) single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
plp
Pleurocapsa sp. PCC 7327
Pathway
plp03410
Base excision repair
plp03430
Mismatch repair
plp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ple7327_3637
03430 Mismatch repair
Ple7327_3637
03440 Homologous recombination
Ple7327_3637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plp03400
]
Ple7327_3637
DNA repair and recombination proteins [BR:
plp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Ple7327_3637
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ple7327_3637
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Ple7327_3637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AFY78832
LinkDB
All DBs
Position
3876540..3878963
Genome browser
AA seq
807 aa
AA seq
DB search
MLQPQWQISPLQKIPSWFIEAIRFYTPGSNGKHAAQILWQRGIREHQQLIEFLDPNAYRP
TSPFAFGQEMKRAIQRLLNAREKGEKVTIWGDFDADGITATSVLWEGLGEFFTQHQQLSY
YIPNRLTESHGLNCPGIDKLAASGTKLIVTCDTGSTNLNEIVYANQLGIDIIITDHHTLP
EERPPVISIINPRYFAKTHPLFHLSGVAVAYKLVEALYQTLPDIPQQPVEELLDLVAIGL
IADLVQLSGDCRYLAQRGIQKLQERSSSGKNQKPTRPGVAFLLEFCQKNGDRPTDISFGL
GPRINAVSRIHGEASFCVELLTSRDAKRCKQLAEAAELANARRKALQKDVTEQVKKQLSR
IDLSTTSVIVLEDSQWQSGVLGLVAGQIAQEYNRPTILLSVAENEERETERQGDKGELIQ
NPPFSLKRFEERAAASPKSKIARGSARSANNINLYELVESQAHLLHRFGGHPFAAGLSLL
AENIPLFREAIDCQLRQKYTDLALKQPIIQADLIVTVSELGKSLFRELKLIEPYGMGNPA
PKLLIKNCWFENVWHQNTQDFRGKKIPYIKTTFKIWDDSSSNGFPGMWWGHYKDEIPLEQ
RCDAIVELDFNPYKKHYEVRLINIRQSISLTEFKSNCAEDSLFDLRNSKNSCELRISNSP
FKPIKDCPTSWNEIQKEYRIAIAQKEKLALAYQAPQTIDPHQIWQQLIGIAKYLNRTGKT
ITLKQLQDKLELSDRTLALGLEALYQLGFKCQKHDSLVQIHYCYSEISQEIEITITRFIE
TVKEEQFQRQYFYKISLSTLQENLICY
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaccgcaatggcaaatttcacccctacaaaaaattccctcctggtttattgaa
gccattcgattttatacgcctggttcaaacggaaagcatgcagcgcaaattctatggcag
cggggaatccgagagcatcaacaattaatcgaatttctcgatccaaatgcctatcgaccc
accagtccttttgcctttggacaagaaatgaagcgagcaattcaacgtcttttaaacgct
cgcgaaaaaggagaaaaagtaacaatttggggagactttgatgcggatggaataacagcc
actagcgttctttgggagggattgggagagttttttacccaacaccaacaactcagttat
tacatccccaatcgcctcactgaatctcatggtttaaattgtccgggaatcgataaacta
gcagcatcgggaacgaaactcatcgttacttgcgacacgggaagcaccaatttaaacgaa
atcgtttacgctaaccaactaggaatagatattattattaccgaccatcatacgcttcct
gaagaaagacctccagttatttctattatcaatccccgctattttgctaaaactcatccc
ttatttcatctctctggcgtagccgttgcctataaattagtagaagcgctttatcaaact
ttacccgatattcctcaacaacctgtagaagaattattagatttagttgcaattggtttg
attgccgatttagtacaactgagtggagattgtcgctatttagctcaaagaggtattcaa
aaattacaagaacgatcgtcctcaggcaaaaatcaaaagccaactcgtcccggtgttgct
tttttattagaattctgtcaaaaaaatggcgatcgcccgacggatatttcctttgggtta
ggaccgagaattaatgctgtcagtcgcattcatggcgaggcgagtttctgcgttgaatta
cttaccagtcgagatgccaaacgttgcaaacaattggcagaagcagcagaattagccaat
gcccgtcgcaaagcattgcaaaaagatgttaccgaacaagtcaaaaagcaactatcccgc
attgatttatcgactacaagcgtaatagttttagaagattctcaatggcaaagtggcgta
ttgggattagttgcaggacaaatcgctcaggaatacaatcgaccgacaattttattaagt
gttgccgagaatgaagagagggagacggagagacagggggacaagggagaattaatccaa
aatccgccgttctccttgaagaggttcgaggagcgtgcggcggcttcgccaaaatccaaa
attgctaggggttctgcgcgttctgctaacaatattaatttgtacgagctagtggaatcg
caagctcatttattacatcgatttggaggtcatccttttgcagcaggattgagtttgctt
gcagaaaatattcctttatttcgagaagcgattgattgccagttacgtcaaaaatacaca
gacttagctttaaagcaacccattatccaagccgatttaatcgtaacagtttccgagtta
gggaaatctctattccgagaactgaaattaattgaaccttatggtatgggaaatccggcc
cccaaattattaattaaaaactgttggtttgagaacgtttggcatcaaaatactcaagat
tttagagggaaaaaaatcccctacataaaaacaacttttaaaatttgggatgattcaagc
tcaaatggttttcctggaatgtggtggggacactataaagatgaaattcctttagagcaa
cgttgcgatgcaattgtcgaacttgactttaatccctataaaaaacactatgaagtgcga
ttaattaatatcagacagagtatctctttgacagaatttaaaagcaattgcgctgaagac
tctttgttcgatctcagaaatagcaagaattcttgcgagcttagaatttctaattcacca
tttaaaccgatcaaagattgtcctacgagttggaatgaaattcagaaagaatatcgaatt
gcgatcgcacaaaaagaaaaactcgctctagcttatcaagcgccacagacaatcgatccc
catcaaatttggcaacagttaatcggtattgctaaatatctaaatcgcacgggtaaaacc
attactctaaaacaattacaagataaattagaattgagcgatcgcaccctcgccctaggt
ctagaagcactttatcagctaggctttaagtgtcaaaagcacgatagtttggtacaaata
cattattgttactccgagatttctcaagaaatagaaataacaattacccgattcatagaa
accgtcaaagaagagcaatttcaacgtcaatatttttataaaatttcactctcaactcta
caagaaaatctgatttgttattaa
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