Pleurocapsa sp. PCC 7327: Ple7327_3878
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Entry
Ple7327_3878 CDS
T02367
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
plp
Pleurocapsa sp. PCC 7327
Pathway
plp03410
Base excision repair
plp03430
Mismatch repair
plp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ple7327_3878
03430 Mismatch repair
Ple7327_3878
03440 Homologous recombination
Ple7327_3878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plp03400
]
Ple7327_3878
DNA repair and recombination proteins [BR:
plp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Ple7327_3878
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ple7327_3878
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Ple7327_3878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AFY79035
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All DBs
Position
complement(4122371..4124350)
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AA seq
659 aa
AA seq
DB search
MRLPNQRWLISSTNPEQIDELVKSTGLSPLLAQVLVNREIVTPKLAQVYIDPESQLLPSP
LEEFSDLALSVELLAEAIATKDKIAICGDYDADGMTSTALLLRTLRYLGAEVDYAIPSRM
KDGYGVNLRIVEEFASAGVGIILTVDNGISAYEPIARAIALGMSVIVTDHHDLPKKLPPA
HAILNPKLLPESSPYCGLAGVGMAYILAVTLARSLGKEEELTDRLLELFTLGTIADLAPL
VGVNRRWLKRGLRQLPKSQLAGIQALMQMAGVSDAQKQLKPDDIGFRLGPRINAVGRIGD
PQMVIELLTTDDSGLALERAMQCEQINRKRQELCEQIERDAIALIEETPIDWRRDRVLVV
VRPEWHHGVIGIVASRLVERYGVPVFISTYEEDASILRGSARGIEEFNVFEALEFCRDLL
GKYGGHKAAGGFSLPAQNLDAFKQKLSAFAHRCLKLEHLKPLIKIDAEANFIQLTPCLYQ
QIDSLQPWGIGNDFPIFWTRNVRVKEQQPVGKNQSHLKLTLAQDDHSEMKAIAWRWGDYF
PLPSRLDIAYKLQENVWNGNKNIELELVGVRLPDPNFIFAINSATKKAIFEYKGRTYVCS
WWETLNELRIQNEQGKVLAVSQGQNIGLLGDSCECTQQVDLTRPHYSQLIHIAFAALND
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgagattgccaaatcagcgatggcttatttcatctaccaaccccgaacaaatagacgaa
ctggtaaaaagtacgggactttctccccttctggcgcaggtgttggtgaatcgagagatc
gtcaccccgaaattagcgcaggtatatatcgatccagaatcacaactcttgccgtcgccg
ctagaagaattctccgatttggcacttagcgtcgagttattagcagaagcgatcgcaacc
aaagacaaaatagccatctgcggcgactacgatgccgatgggatgaccagcactgcctta
ttattacgcactctcagatatttgggggcagaggtagactatgccattcccagtcgcatg
aaagatggctatggcgtcaatctgcgtattgttgaagagtttgccagtgcaggcgtaggc
attattttaacggttgacaatggtatttctgcctatgaaccgattgcgcgcgcgatcgcg
ttgggtatgagcgttatcgttaccgatcaccacgatctcccaaaaaaactccctcccgct
catgcgattctcaaccctaagttacttccagaatcctctccttattgcggacttgcaggc
gttggcatggcttatattttagcagtgactctcgctcgaagtctgggaaaagaagaggaa
ttgacggatcgattgctagaactcttcaccttggggacgattgccgatctcgcgcctttg
gtgggagtgaatcgccgttggttaaaacggggattgcgccagttacccaaatcccaatta
gcaggaattcaagcgttaatgcagatggcaggggttagcgacgcgcaaaagcaactgaaa
cccgacgatatcggttttaggttgggtccccggattaatgccgtcggacgcattggcgat
ccgcaaatggttatcgaattgctgacgactgacgattctggactggctttagaaagggcg
atgcaatgcgagcagatcaaccgcaagcgccaggaattgtgcgaacaaatcgaacgagat
gcgatcgcgctgatcgaagaaactcctatcgactggagacgcgatcgcgttttagtcgtc
gttcgacccgaatggcatcatggggtcatcggcattgttgcctctcgtttagtcgaacgc
tatggcgttccggtgtttattagcacttacgaagaagatgcttctatcttgcgcggttcg
gcaagaggcattgaagaatttaacgtctttgaagccttagaattctgtcgcgatttattg
ggaaaatatgggggacataaagcggctggcggctttagtttacccgcacaaaatttggac
gctttcaagcaaaaactcagcgcttttgcccatcgatgcctcaaattagaacatctcaaa
cctctcattaaaattgatgccgaggcgaattttattcaattgactccctgtctgtaccaa
caaatcgatagcttgcaaccgtggggaattggtaacgattttcctatcttttggacgcgc
aatgttagggttaaagaacagcaacctgtaggaaaaaatcagagtcatctaaagctgact
ctagctcaagatgatcatagtgaaatgaaagcgatcgcttggcgttggggcgattatttt
cccttaccatctcgattggatattgcctataaattgcaagaaaatgtttggaatggaaac
aaaaatattgaattagaacttgttggtgtaagacttcccgatcctaactttatttttgct
attaattccgctacgaaaaaagcgatttttgaatataaaggacgaacttatgtttgtagt
tggtgggaaactttaaatgaattgagaattcaaaacgaacaaggcaaagtattagccgtt
agtcaaggacaaaatataggcttactgggcgatagctgcgaatgcactcaacaagtcgat
ctgactcgacctcattactctcaactaattcacattgcgtttgctgccttaaacgattag
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