Pleurocapsa sp. PCC 7327: Ple7327_4608
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Entry
Ple7327_4608 CDS
T02367
Name
(GenBank) RNA polymerase sigma factor, cyanobacterial RpoD-like family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
plp
Pleurocapsa sp. PCC 7327
Brite
KEGG Orthology (KO) [BR:
plp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plp03021
]
Ple7327_4608
Transcription machinery [BR:
plp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ple7327_4608
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_10
LexA_DNA_bind
HTH_24
HTH_25
HTH_71
MerR
MerR_1
DUF4143
HTH_53
HTH_29
DUF3791
Motif
Other DBs
NCBI-ProteinID:
AFY79703
UniProt:
K9TBA0
LinkDB
All DBs
Position
complement(4920229..4921185)
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AA seq
318 aa
AA seq
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MRTDKNFTDPVRAYLREIGRVPLLTHEEEIHYAKRVQRLVVLENLKESLKQKLGKEPTDS
EWAAAAELTEAELRNCIAAGDAAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQEGTLGM
QRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKSRTIRLPIHITEKLNKIKKAQRQLAQ
ENGRAATIAELAQELELTPKQVREYLERARQPLSLDLRVGDNHDTELGELLEDTGLLPED
YAIHSSLQLDLEKLMADLTPQQREVLALRFGLTDGKPLTLAKIGIRLNISRERVRQIERE
ALSKLRQRKGSIREYLAS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccgacaagaactttaccgacccagtccgcgcctatttaagagaaattggtcgc
gttcccttgctcactcacgaagaggaaatccactatgccaaacgagtacaacgattagtt
gtcttagaaaacctaaaagaatctctgaagcaaaaacttggcaaagaaccaaccgattcc
gagtgggcagccgccgctgagttaacagaagccgaacttcgcaactgcattgcagcagga
gatgcggctaaacggaaaatggttgaagccaatttacgcctagttgtatcggttgccaag
aaatatctcaagcgcaatcttgacttactcgatttaatccaggaaggtacccttggaatg
cagcgaggcgtagagaagttcgatccgactaaaggctatcgcttttccacctatgcttac
tggtggattcgacaagctattacccgcgccattgccgaaaaaagtcgtactatccgcctg
cccatccacatcacagaaaaacttaataaaatcaagaaagcccagcgacagttggctcag
gagaacggacgagcggctaccatagcagaattagctcaagagctggaattaacccccaaa
caagtgcgggagtatctcgaacgtgcccgtcaacctctgtcgctagatttgcgggttgga
gacaatcacgatacagaattgggagaacttctggaggatacggggcttttgccagaggat
tatgctatccattcctcgcttcagttagatttagagaaattgatggcggatttaaccccg
caacagcgagaggttttagcgctgcggttcggactgaccgacggaaagcctctaacgcta
gctaaaattggcattcgtctcaatatcagtcgggaacgagtcagacagatcgaacgggaa
gctctctcgaaactgcgccagcgcaaaggaagtattcgagaatatttggcaagttaa
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