Pseudomonas lundensis: AA042_04125
Help
Entry
AA042_04125 CDS
T05473
Name
(GenBank) type IV secretion protein Rhs
Organism
plq
Pseudomonas lundensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
RHS
DUF6531
SdiA-regulated
eIF2A
Motif
Other DBs
NCBI-ProteinID:
AOZ11931
LinkDB
All DBs
Position
complement(931968..936551)
Genome browser
AA seq
1527 aa
AA seq
DB search
MTPGNAVAYTRAPQVAIVPLNEVQIEDVGRDVSAIDAWLQDISGGAVTLERLQHVAGLVP
VVGNVMALADAIGDIVSLIKNGGSDPLDWVSLGINLVCVAPFPGTTAARVSLRSILSLAR
SELAHTGKIVLGDALIEVMVGHLNATIVGRLEHFLTIAQSQLPDLLEQAGGVGEELVLDL
AKGMRALVDGDMDVKGRLASAQQHITSINTEQLKRNPFHIFTNVYGALRDVQVAAGTSVA
NSAAKLLMPAQAKKRVYEQTEHLIAMAPELRVQLRKLNDPALKGSIGSLLVVLNKAVQLW
RSRNPHALSSSIKTGTTSKARYTQGKGELEVRKKEVPAQNTANPVKNGPCVGSCNSILFS
LGAETFSHTDFSLPGPFPIDWTRTYYSRLSAYDQGALGARWITEFTTRFDLHDKGLVFHD
SDGREHKYALKPVGQAHYDAIENLTLVRVTENSLLLCRGFERRETYVRHGDCFLLAQIEL
RNGAGVMLHHEYRHADQPVLSDLITYQGDLDNVHLHLGTMMDEHGRLTGLWEIRDSVPVR
QLAAYYYDAHGDLINAQDENGAAWTYEYQHHLITRYTDRTNRGMNLQWQGTGPDAKAVRE
WADDGSFDTRLEWDENIRLTYVTDAHGHETWHYYDILGYTYRIRHADGRSEWLFRDHAKN
IVRHVHPDGSTDRYAYDDRSNLLEHTRADHSVMHYAYDDHDQLIKISDAEGGLWLRDYDD
QGNLIEAVDPLGNITEYAYTAAGLPSAIKDANGNEKTLAYNDAGQLVQYTDCSGKTSVWE
YNDLGQMVCFTDAAGNTTEYIYKAGQLIHIKHPDNTEERFSRDAEGRLLAHTDGLNRCTT
WRYTAAGLIDERIDAAEQTLRYRWDRLGQLLALENENRQQATFHYDPVGRLLKETGFDGR
STLYAYDESTGRLASTVDGQRTTHVEFDPTGRLIERTARLGGTTQTETFAYDGNGNLVMA
SNADSRLQWFHDPAGNLLREHQHYLSLQTPVVAVWQHEYDVLNQRIATTRPDGHRVSWLT
YGSGHLLGLRLDEHELIGYERDDLHREVARHQGNHLLQTQQWDPAGRLQEQLLGRSDDKT
TLLKRAYTYDAAGQLTDIHDSRRGPLSYRYDPVGRLLNATSRLGVETFAFDPASNLLDEK
NQQAQRPLDHDPKRNTLMDNLLREYAGSHYDYDERGNQIRRWHNGQHSRLHWDLFDRLVR
FENSQLRVDYAYDPLGRRLYKHSSAHHLNRSEAGSQWNRNEQARKQRELWCGFTLFGWDG
DTLAWESSPAQADGASGKTVHYLYEPGTFVPVAQALRHQPMRLLAQPSYTGAYDIDQDPL
WTHTPQALPIDVLAWYQCDHLGTPQELTDPTGQIAWSAQYKAWGEVIEQRSDWARQKGLT
NPIRFQGQYHDHETGLHYNRYRYYDPRVGRFVSKDPISYAGGLNLYVYAPNPVEWIDALG
LAKKRVGVGGTPKQAQSKVNKDQAPGDITRIDEPEESVPSSQWHAHCKCGSGYNLDGTIH
DKGKGKVSFSRKTIDWLNSHGWSIPTK
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atgacccctggaaatgccgttgcttacacccgtgcgccccaagttgccatcgttccgctc
aatgaagttcagatcgaagatgtcgggcgcgacgtttccgccattgatgcctggctgcaa
gacatcagcggcggggcggttacccttgaacgactgcaacacgttgcaggcttggttccg
gtcgttggcaatgtcatggcgcttgctgatgccattggcgacattgtgagtctgattaaa
aacggtggcagcgacccgctcgactgggtcagtctgggcatcaatctggtgtgtgttgcc
cctttcccaggcaccaccgctgcgcgcgtgagcttgcgctcaatcttgtctttggcccgt
agtgagcttgcccataccggcaagatagtgctcggcgatgcattgattgaagtcatggtt
gggcacctgaatgcaacgatagtgggccggcttgagcactttctgaccattgcccaaagc
cagctaccggatttgctggagcaggcagggggggtgggcgaagagcttgtgttggacctc
gccaaaggaatgagggcgctggtagacggtgacatggacgtgaaggggcgtcttgccagc
gcgcagcaacacatcacgtccatcaacaccgagcagctcaagcgcaacccgtttcacatc
ttcacgaatgtctatggcgctttgcgggatgttcaggtcgctgcgggcaccagcgtggcc
aactcggcggccaaacttctgatgcccgctcaggccaaaaagcgggtgtacgagcagact
gagcatttgatagcgatggcgcccgagctgcgcgtccagctcagaaaacttaacgatcca
gcccttaagggatccatcggatcgcttttggtcgtgctcaacaaagctgttcagttgtgg
cgttcgcgcaacccgcacgcactgagcagtagcatcaaaacggggacgacgagcaaagcc
cgctacacacagggaaaaggtgagctggaagtccggaaaaaagaggtgcctgcccaaaat
acggctaacccggtgaaaaatggaccgtgtgttgggtcttgtaacagcatccttttctct
ttaggggcggaaacgttcagccacacggatttcagcttgcccggcccgttcccgattgac
tggacacgcacctactactcgcgcctgagtgcctacgaccaaggcgccctgggcgcgcgc
tggatcaccgaattcaccacccgctttgacctgcacgacaaggggctggtgttccacgat
tctgacggccgtgagcataaatacgcactcaaacccgtcggccaggcgcactacgacgcc
atcgaaaacctgacgctggtgcgcgtcactgaaaattccttactcctctgccgcggcttt
gagcgcagggaaacctacgtgcgccacggcgactgcttcctgctcgcgcaaatcgaactg
cgcaacggcgcaggcgtcatgctgcaccacgaataccgccacgctgaccaaccggtattg
tccgacctcatcacctaccagggcgacctcgacaacgtccatttacatctgggtacgatg
atggacgaacacgggcgcctcacaggcctgtgggaaatccgcgacagcgtgccggtgcgc
caactggcggcttattactacgatgcccacggcgacctgatcaacgcccaggacgaaaac
ggcgcagcctggacgtacgaataccagcaccacctgatcacccgctacaccgaccgcacg
aatcgcggcatgaacctgcaatggcaaggcaccggccccgacgccaaagcagtccgtgaa
tgggccgacgacggcagcttcgacacgcggctggagtgggacgaaaacatccgcctgacc
tacgtcaccgacgcccacggccacgagacctggcactactacgacatcctcggctacacc
taccgcatccgccatgccgacgggcgttcggaatggctgttccgtgaccacgcgaaaaac
atcgtgcgccacgtgcatcccgacggcagcaccgaccgctacgcctacgacgatcgcagc
aacctgctcgaacatacccgcgccgaccacagcgtcatgcactacgcctacgacgatcac
gaccaactgatcaaaatcagcgacgccgaaggtggcctgtggctgcgtgactacgacgat
cagggcaacctgatcgaagccgtcgacccgttgggcaacataaccgaatacgcctacacc
gcagcgggcttgccgagcgccatcaaagacgccaacggcaacgaaaaaaccctcgcttac
aacgatgccgggcaactggtgcagtacaccgactgctccggcaaaaccagcgtttgggag
tacaacgacctcggccagatggtctgcttcaccgatgccgcgggcaacacaaccgagtac
atctacaaagccgggcaactgatccatatcaagcaccccgataacaccgaagaacgcttc
agccgcgacgcagaaggccgactgctggcccacaccgatggcctcaaccgctgcaccacc
tggcgctacaccgccgccggtttgatcgacgaacgtatcgacgccgccgaacagaccctg
cgctaccgctgggaccgcctcgggcaactgctcgcgctggaaaacgaaaaccggcaacag
gcgacctttcattacgacccggtcggccgcctgctcaaagagaccgggtttgacggacgc
agcaccctgtacgcgtacgacgaatcaaccgggcgcctggccagcaccgtcgacggccag
cgcaccacccacgtcgagttcgaccccaccggccgcctcatcgaacgcaccgcacgcctg
ggcggcaccacccaaaccgaaaccttcgcctacgacggcaacggcaatttggtcatggcc
agcaacgccgacagccgcctgcaatggttccacgacccggcgggcaacctgctgcgcgaa
caccagcactacctgagcctgcaaaccccggtggtcgccgtgtggcagcacgaatacgac
gtgctcaaccaacgcatcgccaccacccgcccggacggccacagagtgagttggctgacc
tacggcagcggccacctgctgggcctgcgcctcgacgaacacgaactgatcggctacgaa
cgcgacgacctgcaccgcgaagtcgcccgccaccagggcaaccacctgctacagacccaa
caatgggacccggccgggcgcctgcaagaacagcttttaggccgcagcgacgacaaaacc
accctgctcaaacgcgcctacacctacgacgccgctggccaactgaccgacatccacgac
agccgccgtgggccgctgtcctaccgctacgacccggtgggccgactgctcaacgccacc
agccgcctgggcgtcgaaaccttcgccttcgacccggccagcaacctgctggatgaaaaa
aaccaacaggcccaacgcccactggaccacgaccccaaacgcaacaccctgatggacaac
ctgctgcgcgaatacgccggcagccactacgactacgacgaacgcggcaaccagatccgc
cgctggcacaacggccagcacagccgcctgcactgggacctgttcgaccgcctggtacgc
tttgaaaacagccaactgcgcgtcgactacgcctacgacccgctgggccgtcgtttgtac
aaacactccagcgcacaccacctaaaccgaagcgaagctggctcgcagtggaaccgtaac
gaacaggcgcgcaaacagcgcgaactgtggtgcggtttcaccttattcggctgggacggc
gacaccctcgcctgggaaagcagccccgcgcaggccgacggcgccagtggcaaaaccgtc
cactacctctacgaacccggcaccttcgtccccgtggcccaggccctgcgccaccaaccg
atgcgcctgctggcccaaccgagttacaccggtgcctacgacatcgaccaggacccgcta
tggacccacaccccgcaagcgctaccgattgacgtactggcctggtaccagtgcgaccac
ctcggcacgccacaagaactgaccgaccccaccggccaaatcgcctggagcgcacagtac
aaagcatggggcgaagtcatagaacaacgctcggactgggcgcggcagaaaggcctgacc
aacccgatcaggtttcaggggcaataccacgatcatgaaacagggctgcactacaatcgg
tataggtactatgatccacgggtcggacggtttgtcagcaaagacccgatcagctatgcg
ggtgggctgaatctttatgtgtatgcgcctaatccggtggagtggattgatgcgttgggg
cttgctaaaaaaagagtgggtgtaggggggacgcctaaacaggcgcaatcgaaagtgaac
aaagaccaggcgccaggagatattacccgtattgatgagccagaggagagtgttcctagt
agtcagtggcacgcgcactgtaagtgcgggtcaggctataatcttgacggcactattcat
gataaaggcaaaggaaaagttagtttttcacggaaaacaatcgactggttaaatagtcat
ggatggagtatccctacaaaatga
DBGET
integrated database retrieval system
