Pseudomonas lundensis: AA042_04415
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Entry
AA042_04415 CDS
T05473
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
plq
Pseudomonas lundensis
Brite
KEGG Orthology (KO) [BR:
plq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plq03009
]
AA042_04415 (rimO)
Enzymes [BR:
plq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AA042_04415 (rimO)
Ribosome biogenesis [BR:
plq03009
]
Prokaryotic type
ribosomal protein modification factors
AA042_04415 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
YajR_YAM
CLP1_P
TRAM
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
AOZ11979
LinkDB
All DBs
Position
1009443..1010780
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AA seq
445 aa
AA seq
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MSTVTTPANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRNVHPSVLAVTGPQQYEQVVNAVHQVVP
PRQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKNWREICPD
LIIRSTFIVGFPGETEEDFQYLLNWLTEAQLDRVGCFQYSPVEGAPANDLDLDVVPDEIK
QDRWERFMAHQQAISAARLQMKIGKEIEVLIDEVDEQGAVGRCFFDAPEIDGNVFIATEK
DIKPGDKIMCRVTDADEYDLWAEAL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgttaccacgccagccaaccccaaggttggcttcgtctctctgggttgcccg
aaagcgctggtcgactccgagcgcatcctgacgcagctgcgtatggaaggctacgatgtc
gtttccacctaccaggacgccgacgtcgtggtggtcaacacctgtggcttcatcgacagc
gccaaggctgagtcgctggaagtcatcggtgaagccatcaaggaaaacggcaaggtcatc
gtgaccggctgcatgggcgtcgaagaaggcaacatccgcaacgtgcacccaagcgtgctg
gcggtgaccggccctcagcagtacgagcaagtggtcaatgccgtgcaccaagtcgtgccg
ccacgtcaggatcacaacccgctgatcgatctggtgccaccccaaggcatcaagctgacc
ccgcgtcattatgcgtacctgaagatttccgaaggctgcaaccacagctgcagcttctgc
atcattccctcgatgcgcggcaaactggtcagccgtccggtaggcgatgtgctggacgaa
gctcaacgcttggtcaagtccggggttaaagagttgctggtcatctcccaggacaccagc
gcatacggcgtggacgtgaaataccgcaccggcttctggaatggcgcccccgtcaaaacc
cgcatgaccgagctgtgtgaagccttgagcacgctgggtgtctgggtgcgcttgcactac
gtttacccgtacccgcacgtggacgagctgattcctttgatggcagcgggcaaaatcctg
ccgtatctggacattcccttccagcacgccagccctaaagtgctcaagtccatgaagcgc
ccggcgttcgaagacaagaccctggcccgcatcaagaactggcgcgaaatctgcccggac
ctgatcatccgctcaaccttcattgtcggcttccccggcgaaaccgaagaagacttccag
tacctgctgaactggctgactgaagcgcaactggaccgcgtaggctgcttccagtactcg
ccggtagaaggcgcaccggccaatgatctggacctggacgtcgtgccagacgagatcaag
caagatcgttgggaacgcttcatggcgcatcagcaagccatcagcgccgcacgcttgcag
atgaaaatcggcaaggagatcgaagtcctgatcgacgaagtggacgagcaaggcgcagtg
ggccgctgcttcttcgacgcaccggaaatcgacggcaatgtgtttattgccaccgaaaaa
gacatcaagccgggtgacaagatcatgtgccgtgtcaccgatgcggacgaatatgacttg
tgggctgaagcgctgtaa
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