Pseudomonas lundensis: AA042_06425
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Entry
AA042_06425 CDS
T05473
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
plq
Pseudomonas lundensis
Pathway
plq00260
Glycine, serine and threonine metabolism
plq00460
Cyanoamino acid metabolism
plq00630
Glyoxylate and dicarboxylate metabolism
plq00670
One carbon pool by folate
plq00680
Methane metabolism
plq01100
Metabolic pathways
plq01110
Biosynthesis of secondary metabolites
plq01120
Microbial metabolism in diverse environments
plq01200
Carbon metabolism
plq01230
Biosynthesis of amino acids
plq01240
Biosynthesis of cofactors
plq04981
Folate transport and metabolism
Module
plq_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
plq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AA042_06425 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AA042_06425 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AA042_06425 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AA042_06425 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AA042_06425 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AA042_06425 (glyA)
Enzymes [BR:
plq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AA042_06425 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AOZ12333
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Position
1450560..1451813
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AA seq
417 aa
AA seq
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MFSRDLTLAKFDADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANSAVYLALLSAGDTILGMS
LAHGGHLTHGATVSSSGKLYNAVQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
AKANADIEKKLNSAVFPGSQGGPLEHVIAGKAVCFKEALQPEFKVYQQQVVKNAQAMASV
FIERGYDVVSGGTENHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKVEECRELATWICDILDDITNEAVIDAVREKVKAICKKLPVYGN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgacacttgccaagttcgacgccgacctttttgccgccatggag
caagaagctcagcgccaggaagaacacattgagctgatcgcttcggaaaactacaccagc
ccagcggtgatggaagctcaaggctcggtactcaccaacaaatacgccgaaggttatccg
ggcaagcgttactacggcggctgcgaatacgtcgacgtggttgaacaactggccatcgac
cgcgccaaggaactgttcggggccgattacgccaacgttcagccccacgccggttcccag
gccaacagcgcggtgtacctggcgctgctgtcggccggcgacaccattctgggcatgagc
ctggcccatggcggtcacttgacccacggcgcaaccgtttcgtcctcgggcaagctgtac
aacgcggtgcagtacggcatcgacgccaacggcctgatcgactacgacgaagtcgagcgt
ctggccgttgagcacaagccaaaaatgatcgtggccggtttctccgcttactcgcagatc
ctggacttcccgcgcttccgtgccatcgctgacaaagtcggcgcttacctgttcgtggac
atggcccacgtggccggcctggttgcagcgggcgtttacccgaacccggttccgttcgcg
gacgtggtcaccaccaccacccacaaaaccctgcgcggcccacgcggcggcctgatcctg
gccaaagccaacgccgacatcgagaagaagctgaactccgctgtcttcccgggttcgcaa
ggcggcccgctggaacacgtgatcgccggtaaagccgtgtgcttcaaagaagccctgcaa
cctgagttcaaggtttaccagcaacaagtggtgaagaacgcccaggccatggcttcggtg
ttcatcgagcgcggttatgacgtggtttcgggcggtactgaaaaccacctgttcctgctg
tcgctgatcaagcaagacatctcgggtaaagacgctgacgccgcactgggcaaggccttc
atcaccgtgaacaaaaactccgtgccgaacgacccacgctccccgttcgtgacctcgggc
ctgcgtttcggtacaccggctgtgaccacccgtggcttcaaagttgaagaatgccgcgag
ttggctacctggatctgcgacatcctggacgacatcaccaacgaagccgtgatcgacgcc
gttcgcgagaaagtcaaagccatctgcaagaagctgccggtttacggcaactga
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