KEGG   Pseudomonas lundensis: AA042_07100
Entry
AA042_07100       CDS       T05473                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
plq  Pseudomonas lundensis
Brite
KEGG Orthology (KO) [BR:plq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:plq03000]
    AA042_07100
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:plq02044]
    AA042_07100
Transcription factors [BR:plq03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    AA042_07100
Secretion system [BR:plq02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   AA042_07100
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 GAF_3 AAA_5 GAF GAF_2 AAA_2 HTH_30 AAA_16 AAA_7
Other DBs
NCBI-ProteinID: AOZ12451
LinkDB
Position
complement(1602168..1603676)
AA seq 502 aa
MFSQIPQPLEYAEALLAHFSRLSQSTDSSTLLSQSAQAMAQLTGCQLSQLYLLDASRERL
ELKAQWLEGTLHPALGSGRSADHCQEPLLQYAISQNRVVDLSNLDSRLHNIDFLPRAGDP
WRSLLAVPMRDSRQTVAGVWMLASCTHMPLQGYAPSLGALGSAALMQMSLLERRPQQGKP
LGRCVSAGTLIGSSPVMRKTYQLINRVVHSPYTVLLLGETGTGKEVVARAIHDSGPRRAQ
PFIVQNCAAFPEDLLESELFGYRKGAFTGADRDRKGLFDAAHGGTLLLDEIGDMPLALQA
KLLRVLQEGEIRPLGCNESHTIDVRIIAATHCDLKQRVSQGRFREDLYYRLAQFPVVLPA
LRERGRDIYDLATHFAAQTCAFLQRRPVVLADSAMAQLACYAFPGNVRELKGLVERAVLL
CDGHELLAEHFALPSELNDESGRLNFRKRMDAMERGLLLDCLRRNAGNQTLAAQELGLAR
RTLLYRLGRLNINSDEIRAYAS
NT seq 1509 nt   +upstreamnt  +downstreamnt
atgtttagtcaaatcccgcagccgctggagtatgccgaagccctgctggcccacttctcc
cgcctgtcacagagcaccgacagcagcacgctgctgagtcagagtgcccaggccatggca
caactcaccgggtgccagttgagtcagctttacctgctcgatgcctctcgcgaacggctg
gaactcaaggctcagtggctggaaggaacgctgcacccggcgttgggctccggacgctct
gccgaccattgccaagagcctttgctgcaatacgcgattagccaaaacagggtcgtggac
ctgagcaacctcgacagccgtctgcacaatatcgatttcctgccccgtgctggcgaccct
tggcgttcgctgttggccgtgccaatgcgcgattcacgtcagaccgtggccggtgtatgg
atgctggccagttgcacgcacatgccgctgcaagggtatgccccgtcattaggcgccttg
ggcagcgccgccttgatgcagatgagcctcttggagcgccgcccgcaacagggcaaaccg
ttgggccgctgtgtgagtgccgggaccctgatcggctccagcccggtgatgcgcaaaacc
tatcaattgatcaatcgcgtggtgcacagcccgtacaccgtgctcctgctgggagagacc
ggcacgggcaaggaagtcgtcgcacgggccattcacgacagtggcccacggcgtgcgcag
cccttcatcgtgcagaactgcgccgcgttccctgaggacctgctcgaaagcgagttgttc
gggtatcgcaaaggggcctttaccggggcggaccgtgaccgcaaagggctgttcgatgcc
gcccacggcggcaccctgttgctggacgaaatcggtgacatgcccctggcgctgcaagcc
aagttattgcgtgtgctgcaagaaggtgaaatccggcctttgggctgcaatgaaagccac
accatcgacgttcgcatcattgcggccacccactgtgacttgaagcaacgggtgagtcag
gggcgttttcgtgaagacctttattaccgcctcgcccagtttccggtggtcctgcctgcc
ctgcgtgagcgcggccgggacatctacgatctggccactcatttcgcggcccaaacctgc
gcatttctacagcgccgcccggtggtgctggcagacagcgccatggcgcaactggcctgt
tacgcctttccgggcaatgtgcgcgagctcaaggggctggttgagcgtgcggtcttgctg
tgtgacgggcatgagctgttggccgagcattttgccctgcccagcgagctgaacgatgag
tcagggcgcctgaattttcgtaagcgcatggacgctatggagcgcggtttgctgctcgac
tgtttacgccgcaacgccggcaaccagacgttggccgcccaggaactgggccttgcacgg
cgcacgctgctgtaccggctggggcgtttgaatatcaattccgatgagattcgcgcctat
gcctcgtga

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