Pseudomonas lundensis: AA042_08095
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Entry
AA042_08095 CDS
T05473
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
plq
Pseudomonas lundensis
Pathway
plq00260
Glycine, serine and threonine metabolism
plq00460
Cyanoamino acid metabolism
plq00630
Glyoxylate and dicarboxylate metabolism
plq00670
One carbon pool by folate
plq00680
Methane metabolism
plq01100
Metabolic pathways
plq01110
Biosynthesis of secondary metabolites
plq01120
Microbial metabolism in diverse environments
plq01200
Carbon metabolism
plq01230
Biosynthesis of amino acids
plq01240
Biosynthesis of cofactors
plq04981
Folate transport and metabolism
Module
plq_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
plq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AA042_08095 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AA042_08095 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AA042_08095 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AA042_08095 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AA042_08095 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AA042_08095 (glyA)
Enzymes [BR:
plq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AA042_08095 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AOZ12617
UniProt:
A0AAX2HA11
LinkDB
All DBs
Position
complement(1804086..1805339)
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAMNAEDQRQEDHIELIASENYTSQRVMQAQGSGLTNKYAEGYP
GKRYYGGCQHVDKVEQLAIDRAKQLFGADYANVQPHSGSQANAAVYLALLNAGDTVLGMS
LAHGGHLTHGASVSFSGKLYHAVQYGIDTATGLIDYDDVERLAVEHQPKMIIAGFSAYSK
TLDFPRFREIADKVGAYLFVDMAHVAGLVAAGLYPNPVPYADVVTTTTHKTLRGPRGGLI
LARGNEALEKKLNAAVFPGGQGGPLMHVIAAKAVCFKEALEPAFTTYQQHVIDNAQAMAE
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVAQCTELAGWICDILDHLGDADIEADVARQVTALCKDFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaggatcagatacaggggtacgacgacgccttgttagcggccatgaat
gccgaagatcagcgtcaggaagatcacatcgaactcatcgcgtccgaaaactacaccagc
cagcgcgtcatgcaggcccaaggcagcggcctgaccaacaagtatgccgagggctatccg
ggcaagcggtactacggtggctgccagcatgtggataaagtcgagcaattggccatcgac
cgcgccaagcaactgttcggcgccgattacgccaacgttcagccgcactcgggcagccag
gccaacgcggcggtctacctggccttgctcaatgccggtgacaccgtgctgggcatgagt
ctggcccatggtggccacttgacccacggcgccagtgtgagtttttccggcaagctctat
cacgccgtgcagtacggcatcgacaccgcgaccgggttgattgactacgacgacgtggag
cggctggccgtcgagcaccagcccaaaatgatcattgccggtttttcggcttactccaaa
accctggatttcccacgctttcgtgagattgcggacaaggtgggcgcgtacctgtttgtc
gacatggcccacgtcgccgggctggtggccgcaggcttatatcccaacccggtgccgtac
gccgacgtggtgaccaccaccacccacaaaaccctgcgcgggccacggggcgggctgatt
ctggcccgtggcaatgaagccctggagaaaaaactcaatgccgccgtgttccccggcggg
cagggcgggccgctgatgcacgtaattgcggccaaggccgtgtgcttcaaggaagctctg
gagcctgcgttcaccacctatcaacagcacgtgatcgacaacgctcaggcgatggccgag
gtgtttatcaaacgcggctatgacgtggtgtccggtggtacggacaaccatttgtttctg
gtcagcctgatccgtcagggcttgaccggcaaagacgccgatgccgcgctgggccgcgcc
cacatcaccgtcaacaagaacgcagtgcccaatgacccgcagtcgccgttcgtgacctcg
gggttgcgcatcggcaccccggcggtcaccacccgcggtttcaaagtggcgcaatgcacc
gagctggctggctggatctgcgacatcctcgatcacctcggcgatgccgacattgaggcg
gacgtagcgcggcaagtgacggcgctgtgcaaagacttcccggtttatcgctga
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