Pseudomonas lundensis: AA042_08340
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Entry
AA042_08340 CDS
T05473
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
plq
Pseudomonas lundensis
Pathway
plq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
plq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AA042_08340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plq03021
]
AA042_08340
Transcription machinery [BR:
plq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AA042_08340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_20
HTH_23
HTH_40
HTH_28
HTH_Tnp_ISL3
GerE
Motif
Other DBs
NCBI-ProteinID:
AOZ15076
UniProt:
A0ABX4GQR7
LinkDB
All DBs
Position
complement(1862751..1863254)
Genome browser
AA seq
167 aa
AA seq
DB search
MSALDRSALHQLYSAHNSWLKGWLRVRLGNAADAADLAQDTFVRVMTARIDTPIREPRGY
LSAIARSLLIDKSRRRTIEQAYLQALSLRPEPVDVSPETRLSIIEMLVSIDTLLDELGSR
TRDIFLAVQLEGLSYVATAERYGVSVTTVKNHLIRAMTRCLLLMEPE
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgcttgatcgctcagcacttcatcagttgtacagcgcccacaacagttggctg
aagggctggttgcgggttcggttgggcaatgcggccgatgccgccgatctggcgcaggat
acgtttgtgcgggtcatgacggcccggatcgacacgccaatccgcgagccacgcggttat
ctgagcgccatcgcacggtcgctgttaatcgataaatcccgtcgccgcaccatcgagcag
gcctatttgcaggctttatcgctgcgccctgaaccggtcgatgtttcgccggaaacgcgg
ctgtcgatcatcgaaatgctggtctcaatcgatacgctgctcgatgaactgggcagccgg
acacgggatattttcctcgcggtacaacttgaaggactcagctacgtggcgacggccgaa
cgctacggcgtgtccgtcaccacggtgaaaaatcatttgattcgggccatgacccgctgc
ctgttgctgatggagcccgaatga
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integrated database retrieval system