KEGG   Pseudomonas lundensis: AA042_08340
Entry
AA042_08340       CDS       T05473                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
plq  Pseudomonas lundensis
Pathway
plq02020  Two-component system
Brite
KEGG Orthology (KO) [BR:plq00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AA042_08340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:plq03021]
    AA042_08340
Transcription machinery [BR:plq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AA042_08340
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_20 HTH_23 HTH_40 HTH_28 HTH_Tnp_ISL3 GerE
Other DBs
NCBI-ProteinID: AOZ15076
UniProt: A0ABX4GQR7
LinkDB
Position
complement(1862751..1863254)
AA seq 167 aa
MSALDRSALHQLYSAHNSWLKGWLRVRLGNAADAADLAQDTFVRVMTARIDTPIREPRGY
LSAIARSLLIDKSRRRTIEQAYLQALSLRPEPVDVSPETRLSIIEMLVSIDTLLDELGSR
TRDIFLAVQLEGLSYVATAERYGVSVTTVKNHLIRAMTRCLLLMEPE
NT seq 504 nt   +upstreamnt  +downstreamnt
atgtcggcgcttgatcgctcagcacttcatcagttgtacagcgcccacaacagttggctg
aagggctggttgcgggttcggttgggcaatgcggccgatgccgccgatctggcgcaggat
acgtttgtgcgggtcatgacggcccggatcgacacgccaatccgcgagccacgcggttat
ctgagcgccatcgcacggtcgctgttaatcgataaatcccgtcgccgcaccatcgagcag
gcctatttgcaggctttatcgctgcgccctgaaccggtcgatgtttcgccggaaacgcgg
ctgtcgatcatcgaaatgctggtctcaatcgatacgctgctcgatgaactgggcagccgg
acacgggatattttcctcgcggtacaacttgaaggactcagctacgtggcgacggccgaa
cgctacggcgtgtccgtcaccacggtgaaaaatcatttgattcgggccatgacccgctgc
ctgttgctgatggagcccgaatga

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