Pseudomonas lundensis: AA042_09555
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Entry
AA042_09555 CDS
T05473
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
plq
Pseudomonas lundensis
Pathway
plq03030
DNA replication
plq03410
Base excision repair
plq03420
Nucleotide excision repair
plq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AA042_09555
03410 Base excision repair
AA042_09555
03420 Nucleotide excision repair
AA042_09555
03440 Homologous recombination
AA042_09555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plq03032
]
AA042_09555
03400 DNA repair and recombination proteins [BR:
plq03400
]
AA042_09555
Enzymes [BR:
plq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AA042_09555
DNA replication proteins [BR:
plq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AA042_09555
DNA repair and recombination proteins [BR:
plq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AA042_09555
NER (nucleotide excision repair)
GGR (global genome repair) factors
AA042_09555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
AOZ12872
LinkDB
All DBs
Position
complement(2105317..2108085)
Genome browser
AA seq
922 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDDMYAEYKANRPSMPDDMRVQIEPLHASVIALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSVLDVEGVKEKFGVSPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVGGGLVDLYEKLDIVPTLPIRGAKNLPAKLEEHREM
AFLSYQLATIKIDVPLDIGLEDLHLKAPDCEKLIALYTELEFKSWIAEVEREAKRAGQVI
AQQAPVESADTEVQYETILDQARFDVWLKKLQDAQLIAFDTETTGLDAQQAQLVGLSFAV
KPGEAAYIPLTHSYMGVPEQLDRDTVLRALKPLLEDPNKSKVGQHAKFDMNILANCAIGG
DPACGISVQGIAFDTMLESYVLDSTATRHDMDSLALKYLGHSTTSFQDIAGKGAKQLTFD
QISLEQAGPYAAEDADVTLRLHNVLHEKLLAIPSLNSVLTDIEMPLVPVLARIERQGALV
DAKLLGVQSVELGDKMVALEREAFEIAGEEFNLSSPKQLGVILYEKLGLPIISKTAKGQP
STAEAVLAELAEQDFPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAVTAT
GRLSSSDPNLQNIPIRTAEGRRIRQAFVAPPGYKLLAADYSQIELRIMAHLAKDEGLLHA
FRNNLDVHSATAAEVFGVELSDVTMDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQA
YIDRYFARYPGVLDYMERTRTQAAEQGYVETIFGRRLYLPEINAKNPALRKGAERTAINA
PMQGTAADIIKKAMVAVDNWLSASGLEARVILQVHDELVLEVREDLVEQVSEALRVHMSD
AATLDVPLVVEVGVGNNWDEAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcacccctcgtcctggtggacggttcttcatatctgtaccgcgctttccac
gcgctgccgccgctgaccacgtccaagggcctgccgacaggtgccgtgaagggcgtgttg
aacatgctgaaaagtctgcgcaagcagtatccggacagcccgttcgcggttgttttcgat
gccaagggcgggacatttcgcgatgacatgtacgccgaatacaaggccaaccgaccgagc
atgcccgatgacatgcgcgtgcaaatcgagcccttgcatgcaagcgtgattgcgctgggc
ttccccctgctgtgtgttgaaggcgttgaagcggatgacgtgatcggcaccctggcgcgc
agcagcgccgccgcagaccgcccggtggtgatctccaccggcgacaaggacatggcgcaa
ctggttgacggtcacatcactttggtcaacaccatgaccggcagcgtgctggacgttgaa
ggtgtgaaagagaagtttggcgtctcgcccgagcagatcattgactacctggcgctgatg
ggcgattcctccgacaacattccgggtgttccgggcattggcccgaagacggcgtctggc
ttgctggttggcgtaggcggcggtctggtcgacttgtacgaaaaactcgacatcgtcccg
acgctgcccattcgtggggccaaaaacctgcccgcgaagcttgaagaacaccgggaaatg
gcatttttgtcgtatcaattggccacgatcaaaatcgatgtgccgctggatatcggcctt
gaagacctgcacctcaaagcgcccgattgcgaaaagctgatcgcgttgtacaccgagctg
gagttcaagagctggatcgctgaagtcgagcgcgaagccaagcgggcgggtcaggtgatt
gcccagcaagcgcctgtcgagagtgccgataccgaggtgcagtacgaaaccatcctcgat
caggcccgttttgatgtgtggctgaagaagttacaggacgcccaactgatcgcgtttgat
accgaaaccaccggtttggatgctcagcaagcgcagttggtgggcctgtcgtttgcagtc
aagccgggtgaagcggcttacattccgttgacgcattcctacatgggcgtgcctgagcaa
ctggaccgtgacaccgtgctgcgcgcccttaagccgctgctcgaagacccgaacaagtcc
aaggtcgggcaacatgccaaatttgacatgaacatcctcgccaactgcgcaatcggcggc
gatccggcgtgtgggatcagtgtgcaaggcattgctttcgacaccatgctggagtcctac
gtgctcgactccacggccactcgccacgacatggacagcctggcgctcaagtatctgggt
cacagcaccaccagttttcaggatattgccggcaaaggggccaagcagctgacctttgac
cagatctcgctggaacaggctggcccttacgccgccgaagacgccgatgtgaccttgcgt
ttgcacaatgtcctgcatgaaaaactgctggcgataccgagcctcaacagcgtgctgacc
gacattgagatgccgcttgtgcctgtattggcgcgcatcgagcgccaaggtgccttggtg
gacgccaagctgttgggtgtgcagagcgttgaactgggcgacaaaatggtcgcgctggag
cgtgaggcgtttgaaattgcgggcgaagaattcaatctcagctcccctaagcaattgggc
gtgatcctgtacgaaaagttgggcttgcccattatcagcaagacggccaaaggtcagcct
tcaaccgctgaagccgttctggccgagttggccgagcaagacttcccgctgcccaaagtg
ctgatgcagtaccgttcgatgagcaagctgaaaagcacctacaccgatcgcctgcctgaa
cagatcaacccgcgcacggggcggattcacacgtcctaccaccaggcggtcacggcgaca
ggccgtttgtcgtccagtgatccgaacctgcagaacatcccgattcggacggcggaaggc
cgccggattcgtcaggcattcgtcgcgccaccaggttacaaattgctggcggcggactac
tcgcaaatcgagctgcggatcatggcgcatctggccaaggacgaaggcttgttgcatgcc
ttccgcaataatctggacgtacacagtgcgaccgcggcggaagtgttcggggttgagctg
agcgatgtcaccatggaccagcgacgcagtgccaaggcgatcaactttggtttgatctac
gggatgagcgctttcggtctggccaagcaaatcggggtcgaccgcaagcagtcgcaggcg
tacatcgaccgttatttcgcacgctaccccggcgtactcgactacatggagcgcacgcgc
acgcaggcggctgagcaagggtatgtcgagaccattttcggccgtcgcctgtacttgcct
gagatcaatgcgaagaacccggccttgcgcaaaggcgccgagcgcaccgcgatcaacgca
ccgatgcagggcacggcggctgacatcatcaagaaagccatggtggcggtggataactgg
ttgagcgcttcggggcttgaggcgcgcgtcatcctgcaagtgcacgatgaattggtgctg
gaagtgcgcgaagacctggtggaacaggtgagcgaagcgctgcgcgtacacatgagtgac
gccgccacgctggatgtgccactggtggtggaagtgggcgtcggcaataactgggatgag
gcgcactaa
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