Pseudomonas lundensis: AA042_10085
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Entry
AA042_10085 CDS
T05473
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
plq
Pseudomonas lundensis
Pathway
plq00300
Lysine biosynthesis
plq00470
D-Amino acid metabolism
plq01100
Metabolic pathways
plq01110
Biosynthesis of secondary metabolites
plq01120
Microbial metabolism in diverse environments
plq01230
Biosynthesis of amino acids
Module
plq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
plq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AA042_10085
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AA042_10085
Enzymes [BR:
plq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AA042_10085
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AOZ12964
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Position
complement(2213023..2214270)
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AA seq
415 aa
AA seq
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MDAFNYRDGELFAEGVSLTAIAERFGTPTYVYSRAHIEAQYNAYADALSGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGSADKIVFSGVGKTRDDMRRALEVGVH
CFNVESTDELERLQVVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVVGVDCHIGSQLTTLDPFIDALDRLLALIDRLGDCGIYLRHIDLGGGL
GVRYRDEEPPLAADYIKAVRERIEGRDLALVFEPGRFIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVRPRDTEARAYDIVGPICETGDFLAKDRQLALAEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGDQAFEVRRRETVAELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaactaccgggacggcgagttattcgctgaaggtgtttcgctgacggcc
atcgccgagcgttttggtacgcccacgtatgtgtattcccgggcccacatcgaggcgcaa
tacaacgcgtatgccgacgcattgagcggcatgccgcatctggtgtgttttgcagttaaa
gccaactccaacctgggtgtactcaatgtcctggcgcgtttgggcgccggttttgacatc
gtgtcccgtggcgagctggagcgtgtgctggccgcaggcggctcggctgacaagatcgtg
ttttccggtgtcggcaagacccgcgatgacatgcgtcgcgcactcgaagtgggcgtgcat
tgcttcaacgtcgagtccaccgacgagctggagcgcctgcaggtcgtggccgccgagatg
ggcgtgcgtgcgccgatctcgctgcgggtcaacccggatgtggacgcgggcacccacccg
tacatctccactggcctcaaagaaaacaaattcggtatcgccatcgcggacgcagaggat
gtgtacatccgtgctgcgcagttgccgaacctcgaagtggttggcgtcgattgccacatc
ggttcgcaactgaccacccttgacccgttcatcgatgcgctcgaccgcctgctggcgttg
atcgaccggttgggcgactgcgggatttacctgcgccatatcgacctgggcggtggattg
ggcgtgcgttatcgcgatgaagagcctccgctggcggccgactacatcaaggcggtgcgt
gagcgcatcgagggccgtgatctggcgctggtgttcgagccgggccgtttcattgtggcc
aacgcgggcgtgctgctgacacaggtcgagtacctcaagcacaccgaacacaaagacttc
gccatcgttgatgcggcgatgaatgacctgatccgccctgcgctgtatcaggcctggatg
gacgtgacagcggttcgcccgcgcgacactgaagcccgtgcctatgacatcgtgggtccg
atctgcgaaaccggcgacttcctggccaaagaccgccagttggcgttggccgaaggtgat
ctgctggcggtgcattcggccggtgcctatggttttgtcatgagctctaactacaacacc
cgtggccgtgcggccgaggtgctggtggacggcgatcaggcgttcgaagtgcgtcgtcgc
gagacggttgccgagctgtttgctggcgaaagcctgctgccggagtga
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