Pseudomonas lundensis: AA042_10630
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Entry
AA042_10630 CDS
T05473
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plq
Pseudomonas lundensis
Pathway
plq03420
Nucleotide excision repair
plq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AA042_10630
03430 Mismatch repair
AA042_10630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plq03400
]
AA042_10630
Enzymes [BR:
plq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AA042_10630
DNA repair and recombination proteins [BR:
plq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AA042_10630
MMR (mismatch excision repair)
Other MMR factors
AA042_10630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_22
AAA_11
RHH_1
FitA-like_RHH
Motif
Other DBs
NCBI-ProteinID:
AOZ13062
UniProt:
A0AAX2HDU6
LinkDB
All DBs
Position
complement(2338669..2340852)
Genome browser
AA seq
727 aa
AA seq
DB search
MREDLSLLLNSLNDAQRQAVTASVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSVL
SVTFTNKAAAEMRHRIEQLMGINPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPVRQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACQRAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSTDFPDAETIRLEQNYRSTAGILKAANALIA
NNTGRMGKELWTDGGDGEAINLYAAFNEHDEARYVVETIESALKTGLAHNDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPARGI
GEKTVEAIREHARHNDVSMWEAMRQLIANKALPGRASGAIAGFVELIESLAAKVMEMPLH
LMTQTVIEQSGLIAYHQAEKGEKGQARVENLEELVSAARNFENTEEDEELTPLAAFLGHA
SLEAGDTQAQEHEDGIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
QQSASTLFGGSEIPETEFKLGQMVKHAVFGEGVILNFEGAGAQARVQVNFSEGSKWLMMG
YAKLEAV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaagatctctctctcttattgaattccctcaacgatgcccaacgtcaggccgtc
acggccagtgtcgggcgtcagttggtcctggccggcgcaggttccggcaaaacccgtgtg
ctggtgcaccgtatcgcctggttgatccaggtcgagaacgcctcaccccactccgtcctg
tcggtgacgttcaccaacaaggccgctgccgagatgcgtcatcgcatcgaacagctcatg
gggatcaacccggccggcatgtgggtcgggacgttccacgggctggcgcatcgcctgctg
cgggctcactggcaagaagccgggctgagccagaccttccagatcctcgacagcgacgac
cagcaacgcttggtcaagcgtgtgattcgggaactggggctggacgaacagcgttggcca
gtgcgtcaggcgcagtggtttatcaacggtcaaaaagacgagggcctgcgtccgcaacat
attcaggccagcggcgatttgttcctggccaccatgcgcagcatttatgaggcctatgag
gccgcgtgccagcgcgcaggtgtgatcgacttctccgagttgctgttgcgtgcgctcgat
ctgtggcgcgataacccgggcctgctggcgcactatcaaaagcgtttccggcacattctc
gtggacgagttccaggacaccaacgccgttcaatacgcctggttgcgcttgctggccaag
ggtggcgacagcttgatggtggtcggcgatgacgatcagtcgatctacggctggcgcggc
gccaaaattgagaacatctaccagtactccacagacttcccggacgccgaaaccattcgt
ctggagcaaaactatcgctccacggcgggcatcctcaaggccgccaacgcgctgattgcc
aataacaccgggcgcatgggtaaagagctgtggaccgacggcggcgatggtgaagcgatc
aatctgtacgcggcattcaacgagcacgatgaagcccgctacgtggttgaaaccatcgaa
agcgcgctgaaaaccgggctggcgcacaacgacatcgccattttgtatcgctccaacgcc
caatcacgggtattggaagaggcgttgttgcgcgaacgtattccttatcgaatttatggc
ggccagcgcttcttcgaacgcgccgagatcaagaacgccatggcctacctgcgtttgctt
gaaggccgtgggaatgatgctgcactggagcgggtgattaacgtcccggctcgcggtatt
ggcgaaaaaaccgtcgaagcgattcgtgaacacgcacgtcacaatgatgtgtcgatgtgg
gaagccatgcgccagctgatcgccaataaagcgctgcccggccgtgcgtcgggtgccatt
gccggttttgtcgaattgatcgaaagcctcgcggcaaaagtcatggagatgcctttgcat
ctgatgacccagaccgtgatcgagcaaagcgggctgattgcctaccaccaggctgaaaaa
ggtgagaaaggccaggcccgggtagaaaaccttgaggaactggtcagcgccgcgcgcaac
ttcgagaacacggaagaagacgaagaactgacaccgttggccgcattcctcggccatgcg
tcgctggaggccggcgacacccaggcgcaagagcacgaagacggcatccagttgatgacc
ctgcacagcgccaaagggctggaattcccctacgtgttcctggtgggcatggaagaaggc
ctgttcccgcacaagatgagccttgaagagcccggtcgtcttgaggaggagcgccgactg
gcgtacgtgggcatcacacgggccatgcagaacctggtgatgacctatgctgagacccga
cgtctttacggtagcgagacctacaacaaggtttcacgcttcgtacgtgaagtgccaaaa
gggctgattcaggaagtgcgtttgtccaacagcgtcagccgccctttcggcggcggtcaa
cagcagagcgccagcaccctgtttgggggttcagagattccggaaaccgaattcaaactg
ggtcagatggtcaagcatgcggtgttcggtgaaggtgtgatcctcaacttcgagggcgct
ggtgcgcaggcgcgggtgcaggtcaacttctctgaaggcagcaagtggctgatgatgggc
tacgccaaacttgaggcggtctga
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