Pseudomonas lundensis: AA042_12660
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Entry
AA042_12660 CDS
T05473
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
plq
Pseudomonas lundensis
Pathway
plq02024
Quorum sensing
plq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AA042_12660
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AA042_12660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plq03019
]
AA042_12660
03036 Chromosome and associated proteins [BR:
plq03036
]
AA042_12660
Messenger RNA biogenesis [BR:
plq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AA042_12660
Chromosome and associated proteins [BR:
plq03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
AA042_12660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Gag_p24_C
Motif
Other DBs
NCBI-ProteinID:
AOZ13406
UniProt:
A0A266NF02
LinkDB
All DBs
Position
2806011..2806271
Genome browser
AA seq
86 aa
AA seq
DB search
MSKGHSLQDPYLNTLRKEKVGVSIYLVNGIKLQGTIESFDQFVILLKNTVSQMVYKHAIS
TVVPVRPIRLPSAAESEQADAEPGNA
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagggcattcgctacaagacccttacttgaatactttgcgtaaagagaaggtt
ggcgtttccatctacctggtcaacgggatcaagctgcaggggaccatcgagtctttcgac
cagttcgtgattctgctgaaaaacaccgtcagccaaatggtttacaaacacgctatctcg
acagtcgttcctgtgcgtccaattcgtctgccaagcgcagcagaatcggaacaagcagac
gctgagccaggtaacgcctga
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