KEGG   Pseudomonas lundensis: AA042_12660
Entry
AA042_12660       CDS       T05473                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
plq  Pseudomonas lundensis
Pathway
plq02024  Quorum sensing
plq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:plq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AA042_12660
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AA042_12660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:plq03019]
    AA042_12660
   03036 Chromosome and associated proteins [BR:plq03036]
    AA042_12660
Messenger RNA biogenesis [BR:plq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     AA042_12660
Chromosome and associated proteins [BR:plq03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    AA042_12660
SSDB
Motif
Pfam: Hfq LSM Hfq_1 Gag_p24_C
Other DBs
NCBI-ProteinID: AOZ13406
UniProt: A0A266NF02
LinkDB
Position
2806011..2806271
AA seq 86 aa
MSKGHSLQDPYLNTLRKEKVGVSIYLVNGIKLQGTIESFDQFVILLKNTVSQMVYKHAIS
TVVPVRPIRLPSAAESEQADAEPGNA
NT seq 261 nt   +upstreamnt  +downstreamnt
atgtcaaaagggcattcgctacaagacccttacttgaatactttgcgtaaagagaaggtt
ggcgtttccatctacctggtcaacgggatcaagctgcaggggaccatcgagtctttcgac
cagttcgtgattctgctgaaaaacaccgtcagccaaatggtttacaaacacgctatctcg
acagtcgttcctgtgcgtccaattcgtctgccaagcgcagcagaatcggaacaagcagac
gctgagccaggtaacgcctga

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