Pseudomonas lundensis: AA042_13525
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Entry
AA042_13525 CDS
T05473
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
plq
Pseudomonas lundensis
Pathway
plq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AA042_13525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plq03400
]
AA042_13525
Enzymes [BR:
plq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AA042_13525
DNA repair and recombination proteins [BR:
plq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AA042_13525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AOZ13550
LinkDB
All DBs
Position
3008283..3011732
Genome browser
AA seq
1149 aa
AA seq
DB search
MTVATSLNAGFMVVHGNRLDELRSLVVSWMRMYPLAPLENEIALVQSNGIAQWLKLALAE
DAQDDDTGGCGIAAAIDVQLPGTFLWQLYRLVLGSEEIPAKSLLDKAPLTWRLMRLLPAL
IDQPHFEPLQRFLTHDTDLRKRYQLSERLADLFDQYQVYRADWLEDWAAGRHQLRNARGE
TPPLSPANCWQAELWRALLLDVGEEGMAQSRAGVHQRFIEKINSLEQAPPGLPARVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWSDIVADKDLLRHQYKRQARKAGMPTAL
DVDILHQHAHPLLAAWGKQGRDYINLLDSFDDPNSYRSAFRDGRIDLFSEVEPLNLLNQL
QDDILELRPLSETREYWPAVDLEKDQSIRFHIAHSAQREVEILHDQLLARFSENPDLHPR
DVIVMVPDVDSYAPHIRAVFGQIDRDDRRFIPFTLADQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRARFGVQERDLPTLHRWIEGAGIRWGLNAEQRAGLGLPPHLEQNS
WRFGLRRMLLGYAVGSGEGCDGIEPYDEIGGLDAVLIGPLVALLDALEIAHQELSQPALP
HQWGERLQALMQLFFQAETDHDDYLLAQLEALRESWLETCELVGLQDALPLTVVREAWLT
GLDQGKLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARDQLYISWVGRSIRDNSERPACVLIGQLRDHLASGWRLPQ
GEDLLDAMTQEHPLQPFSTRYFHEGNPKLFSYAREWQQLHEPQSEVPVPIHLSAHVQEEP
INLTQLQDFLRNPVRHFFSQRLKVFFEAAHVPLADEEPFVLNALERYTLSDSLLEAALAQ
PDQLEKALHTRATRLQGSGLLPMAGFGESLQHELIEPLPDVLQRYQQLLGMWPTSLNSAL
PVRFEDHGLVLEGWLANLHQRSDNGLLSITTIPNSIGAVKTRKWHRLTRPWVNHLVACAT
GLEMSTALVASDDTLLLAPLDAKQAAEILGNLMMAWLAGMSRPLPIAVKTAFVWLGQNDP
AKAAAAAQKTYEGDGQTSEGERRESAALSRQYPDYAALMAVEEFEAWCDALYRPLFDAPW
RSLTGEESR
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgacggttgctacgtccctcaatgcgggttttatggtggttcacggtaaccgtcttgat
gaactgcgcagcttggtcgtcagctggatgcgcatgtatcccttggctcccttggagaac
gaaattgctctcgtccaaagcaatggcattgctcaatggctgaagctggccttagccgaa
gatgcacaggacgatgatacgggtggctgcggcattgcggcagcgatagacgttcagctc
cctggcacgtttttgtggcagctgtatcgacttgtacttggcagcgaagagatccccgcc
aagtctttgctcgataaagcccccttaacatggcgactgatgcgcctgttacccgccctg
atcgatcagccccatttcgagcctctgcagcgttttttgacgcatgacactgatctgcgc
aaacgctatcaattgtcggaacgccttgcagacctgtttgaccaataccaggtgtatcgc
gcggactggctcgaagattgggccgccgggcgccatcaattacgaaatgcgcgaggcgaa
accccgccgttgagccctgccaattgctggcaagcggaactgtggcgcgccttgttgctg
gatgtcggtgaagaaggcatggctcaaagccgtgccggtgttcatcagcgttttattgaa
aagataaacagtcttgaacaagcgccgccgggcttgcctgccagggtcatcgtatttggt
atttcgtcactgccagctcaggccctcgaagcgctggcgggacttgcacgcttcagccaa
gtgttgctgtgcgtgcacaacccgtgtcgccatcattggtctgacatcgttgccgataaa
gatctgctacggcatcaatacaaacgccaagcgcgtaaagccggcatgcctacagcattg
gacgtagacatcctgcatcaacacgcccaccccttattggcagcgtggggcaagcagggc
cgtgattacattaacctgctcgacagttttgatgatcccaacagctatcgatctgcgttc
cgtgatggccgcatcgatctgttcagtgaagtggaacccctcaacctgctcaaccaattg
caggacgacatccttgagctgcgcccgttgagcgaaacccgcgagtattggcctgctgtg
gatttggaaaaagaccaatccatccgtttccacattgcgcacagtgcgcagcgagaagtt
gagattcttcacgatcaattactggcgcgttttagcgaaaatcctgaccttcatccacgt
gatgtgatcgtgatggtgccggatgtcgacagttacgccccgcatatacgcgccgtgttc
gggcagatcgatcgcgatgatcgccgattcattccgttcacgctggccgaccagggccag
cgagggcgggatccacttttgatcgcggtcgagcacttgctcaaactgccagacagccga
ttccccgtcagtgaaattcttgacctgctcgacgtaccggccttgcgtgcccgctttggc
gttcaagagcgcgacctgcccaccttgcaccgctggattgaaggtgcaggtattcgctgg
ggattaaatgccgagcagcgtgcaggcctagggttgccaccgcaccttgagcaaaacagt
tggcgttttggtctgcgccgcatgctactgggatacgcggtgggcagcggtgaagggtgc
gatggcattgagccttacgacgaaatcggcggtctggacgcggtcttgattggcccgctg
gtggccctgttggatgcgctcgaaattgcgcaccaggagctatcgcaaccggctttaccg
catcaatggggcgaacggcttcaagcgttgatgcagctgtttttccaggctgaaaccgat
catgacgactacctgctggcccagcttgaagcgctgcgcgaaagctggctggagacctgt
gagctggtcggtctgcaagatgcattacccctgacagtcgtgcgtgaagcctggctgacc
gggctggaccaaggcaaactttctcagcgctttctggccggggcagtcaatttctgcacg
ttgatgccgatgcgggccatcccgttcaaactcgtgtgcttgctgggtatgaacgatggc
gactacccgcgcgctcagcccccgctggattttgacttgatgggcagcgactaccgtccg
ggcgaccgttcccgccgggaagatgaccgttacctgctgctggaagcgctactttcggcc
cgcgatcagctctatatcagctgggtcggacgaagtatccgtgataacagtgagcgcccc
gcatgcgtattaattggccagttgcgtgatcacttggccagcggctggaggctcccgcag
ggtgaagacttgctggacgccatgacacaggagcatccgcttcagccattcagcactcgc
tattttcatgaaggcaatcccaagctattcagttatgcccgtgagtggcagcaactccat
gagccgcaaagcgaagtgcccgtgcccatccatttatcggctcacgtacaagaagaaccg
atcaatctcacccagcttcaggactttttacgtaaccccgtgcgtcacttcttcagccag
cggctaaaagtgttctttgaggccgcgcacgtgcctttggccgacgaagagcccttcgtg
ctcaatgccttggagcgctatacccttagcgacagcttgcttgaggccgccctggcgcaa
cctgaccagctcgaaaaagcactgcacactcgcgccacccggttacaaggcagtggctta
ttgcccatggccggatttggcgaatcattgcagcacgagctgatcgaaccgttacctgac
gtattgcagcgttatcagcagctattaggtatgtggccaacctccctcaacagtgcccta
cctgtcaggtttgaagatcatggcctggtccttgaaggctggttggccaatctgcatcag
cgcagcgacaacggcctactctccattacgacaattcctaacagcattggcgcagtcaaa
acccgtaaatggcatcgattgacgcgcccgtgggttaaccacttggtggcctgtgccacc
ggtttagagatgtccaccgctttggtggcgagcgatgacaccttgctgcttgcgcccctt
gatgcgaagcaggccgccgagatccttggcaatttgatgatggcctggctggcaggtatg
agtcgcccgctacccatcgcggtcaaaacagcctttgtgtggctgggccaaaacgatcct
gccaaagccgctgcggccgcccagaaaacctatgaaggcgacggccagaccagcgaaggt
gagcggcgtgaaagcgctgctctgtcccggcagtaccccgactacgcagccttgatggcg
gtagaagaatttgaagcctggtgcgatgcgctttaccgcccgttgttcgacgcgccttgg
cgctccttgaccggcgaggagagccgctga
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