KEGG   Pseudomonas lundensis: AA042_13525
Entry
AA042_13525       CDS       T05473                                 
Name
(GenBank) exodeoxyribonuclease V subunit gamma
  KO
K03583  exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Organism
plq  Pseudomonas lundensis
Pathway
plq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:plq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AA042_13525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plq03400]
    AA042_13525
Enzymes [BR:plq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     AA042_13525
DNA repair and recombination proteins [BR:plq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AA042_13525
SSDB
Motif
Pfam: Exonuc_V_gamma RecC_C
Other DBs
NCBI-ProteinID: AOZ13550
LinkDB
Position
3008283..3011732
AA seq 1149 aa
MTVATSLNAGFMVVHGNRLDELRSLVVSWMRMYPLAPLENEIALVQSNGIAQWLKLALAE
DAQDDDTGGCGIAAAIDVQLPGTFLWQLYRLVLGSEEIPAKSLLDKAPLTWRLMRLLPAL
IDQPHFEPLQRFLTHDTDLRKRYQLSERLADLFDQYQVYRADWLEDWAAGRHQLRNARGE
TPPLSPANCWQAELWRALLLDVGEEGMAQSRAGVHQRFIEKINSLEQAPPGLPARVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWSDIVADKDLLRHQYKRQARKAGMPTAL
DVDILHQHAHPLLAAWGKQGRDYINLLDSFDDPNSYRSAFRDGRIDLFSEVEPLNLLNQL
QDDILELRPLSETREYWPAVDLEKDQSIRFHIAHSAQREVEILHDQLLARFSENPDLHPR
DVIVMVPDVDSYAPHIRAVFGQIDRDDRRFIPFTLADQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRARFGVQERDLPTLHRWIEGAGIRWGLNAEQRAGLGLPPHLEQNS
WRFGLRRMLLGYAVGSGEGCDGIEPYDEIGGLDAVLIGPLVALLDALEIAHQELSQPALP
HQWGERLQALMQLFFQAETDHDDYLLAQLEALRESWLETCELVGLQDALPLTVVREAWLT
GLDQGKLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARDQLYISWVGRSIRDNSERPACVLIGQLRDHLASGWRLPQ
GEDLLDAMTQEHPLQPFSTRYFHEGNPKLFSYAREWQQLHEPQSEVPVPIHLSAHVQEEP
INLTQLQDFLRNPVRHFFSQRLKVFFEAAHVPLADEEPFVLNALERYTLSDSLLEAALAQ
PDQLEKALHTRATRLQGSGLLPMAGFGESLQHELIEPLPDVLQRYQQLLGMWPTSLNSAL
PVRFEDHGLVLEGWLANLHQRSDNGLLSITTIPNSIGAVKTRKWHRLTRPWVNHLVACAT
GLEMSTALVASDDTLLLAPLDAKQAAEILGNLMMAWLAGMSRPLPIAVKTAFVWLGQNDP
AKAAAAAQKTYEGDGQTSEGERRESAALSRQYPDYAALMAVEEFEAWCDALYRPLFDAPW
RSLTGEESR
NT seq 3450 nt   +upstreamnt  +downstreamnt
atgacggttgctacgtccctcaatgcgggttttatggtggttcacggtaaccgtcttgat
gaactgcgcagcttggtcgtcagctggatgcgcatgtatcccttggctcccttggagaac
gaaattgctctcgtccaaagcaatggcattgctcaatggctgaagctggccttagccgaa
gatgcacaggacgatgatacgggtggctgcggcattgcggcagcgatagacgttcagctc
cctggcacgtttttgtggcagctgtatcgacttgtacttggcagcgaagagatccccgcc
aagtctttgctcgataaagcccccttaacatggcgactgatgcgcctgttacccgccctg
atcgatcagccccatttcgagcctctgcagcgttttttgacgcatgacactgatctgcgc
aaacgctatcaattgtcggaacgccttgcagacctgtttgaccaataccaggtgtatcgc
gcggactggctcgaagattgggccgccgggcgccatcaattacgaaatgcgcgaggcgaa
accccgccgttgagccctgccaattgctggcaagcggaactgtggcgcgccttgttgctg
gatgtcggtgaagaaggcatggctcaaagccgtgccggtgttcatcagcgttttattgaa
aagataaacagtcttgaacaagcgccgccgggcttgcctgccagggtcatcgtatttggt
atttcgtcactgccagctcaggccctcgaagcgctggcgggacttgcacgcttcagccaa
gtgttgctgtgcgtgcacaacccgtgtcgccatcattggtctgacatcgttgccgataaa
gatctgctacggcatcaatacaaacgccaagcgcgtaaagccggcatgcctacagcattg
gacgtagacatcctgcatcaacacgcccaccccttattggcagcgtggggcaagcagggc
cgtgattacattaacctgctcgacagttttgatgatcccaacagctatcgatctgcgttc
cgtgatggccgcatcgatctgttcagtgaagtggaacccctcaacctgctcaaccaattg
caggacgacatccttgagctgcgcccgttgagcgaaacccgcgagtattggcctgctgtg
gatttggaaaaagaccaatccatccgtttccacattgcgcacagtgcgcagcgagaagtt
gagattcttcacgatcaattactggcgcgttttagcgaaaatcctgaccttcatccacgt
gatgtgatcgtgatggtgccggatgtcgacagttacgccccgcatatacgcgccgtgttc
gggcagatcgatcgcgatgatcgccgattcattccgttcacgctggccgaccagggccag
cgagggcgggatccacttttgatcgcggtcgagcacttgctcaaactgccagacagccga
ttccccgtcagtgaaattcttgacctgctcgacgtaccggccttgcgtgcccgctttggc
gttcaagagcgcgacctgcccaccttgcaccgctggattgaaggtgcaggtattcgctgg
ggattaaatgccgagcagcgtgcaggcctagggttgccaccgcaccttgagcaaaacagt
tggcgttttggtctgcgccgcatgctactgggatacgcggtgggcagcggtgaagggtgc
gatggcattgagccttacgacgaaatcggcggtctggacgcggtcttgattggcccgctg
gtggccctgttggatgcgctcgaaattgcgcaccaggagctatcgcaaccggctttaccg
catcaatggggcgaacggcttcaagcgttgatgcagctgtttttccaggctgaaaccgat
catgacgactacctgctggcccagcttgaagcgctgcgcgaaagctggctggagacctgt
gagctggtcggtctgcaagatgcattacccctgacagtcgtgcgtgaagcctggctgacc
gggctggaccaaggcaaactttctcagcgctttctggccggggcagtcaatttctgcacg
ttgatgccgatgcgggccatcccgttcaaactcgtgtgcttgctgggtatgaacgatggc
gactacccgcgcgctcagcccccgctggattttgacttgatgggcagcgactaccgtccg
ggcgaccgttcccgccgggaagatgaccgttacctgctgctggaagcgctactttcggcc
cgcgatcagctctatatcagctgggtcggacgaagtatccgtgataacagtgagcgcccc
gcatgcgtattaattggccagttgcgtgatcacttggccagcggctggaggctcccgcag
ggtgaagacttgctggacgccatgacacaggagcatccgcttcagccattcagcactcgc
tattttcatgaaggcaatcccaagctattcagttatgcccgtgagtggcagcaactccat
gagccgcaaagcgaagtgcccgtgcccatccatttatcggctcacgtacaagaagaaccg
atcaatctcacccagcttcaggactttttacgtaaccccgtgcgtcacttcttcagccag
cggctaaaagtgttctttgaggccgcgcacgtgcctttggccgacgaagagcccttcgtg
ctcaatgccttggagcgctatacccttagcgacagcttgcttgaggccgccctggcgcaa
cctgaccagctcgaaaaagcactgcacactcgcgccacccggttacaaggcagtggctta
ttgcccatggccggatttggcgaatcattgcagcacgagctgatcgaaccgttacctgac
gtattgcagcgttatcagcagctattaggtatgtggccaacctccctcaacagtgcccta
cctgtcaggtttgaagatcatggcctggtccttgaaggctggttggccaatctgcatcag
cgcagcgacaacggcctactctccattacgacaattcctaacagcattggcgcagtcaaa
acccgtaaatggcatcgattgacgcgcccgtgggttaaccacttggtggcctgtgccacc
ggtttagagatgtccaccgctttggtggcgagcgatgacaccttgctgcttgcgcccctt
gatgcgaagcaggccgccgagatccttggcaatttgatgatggcctggctggcaggtatg
agtcgcccgctacccatcgcggtcaaaacagcctttgtgtggctgggccaaaacgatcct
gccaaagccgctgcggccgcccagaaaacctatgaaggcgacggccagaccagcgaaggt
gagcggcgtgaaagcgctgctctgtcccggcagtaccccgactacgcagccttgatggcg
gtagaagaatttgaagcctggtgcgatgcgctttaccgcccgttgttcgacgcgccttgg
cgctccttgaccggcgaggagagccgctga

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