Pseudomonas lundensis: AA042_15010
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Entry
AA042_15010 CDS
T05473
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
plq
Pseudomonas lundensis
Pathway
plq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
plq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AA042_15010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plq03021
]
AA042_15010
Transcription machinery [BR:
plq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AA042_15010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_24
HTH_20
GerE
HTH_28
HTH_10
TnsD
HTH_IclR
HTH_Tnp_ISL3
HTH_40
Xre-like-HTH
Trp_repressor
HTH_38
PhyR_sigma-like
HTH_5
HTH_36
HTH_11
HTH_AsnC-type
HTH_Crp_2
Rv2175c_wHTH
HTH_DeoR
HTH_7
HTH_26
HTH_31
Phage_TAC_14
LacI
Motif
Other DBs
NCBI-ProteinID:
AOZ15146
UniProt:
A0ABX4GKY3
LinkDB
All DBs
Position
complement(3322098..3322586)
Genome browser
AA seq
162 aa
AA seq
DB search
MSQSNTIEGLYLDHHRWLTGWLRHKLGCPQGAADLAQDTFMRLLTARETPDIAQPRAFLT
TVAKRVLFNHYRRQDLERAYLLALAEQPQALAPSEEERAIILQTLMELDQLLDGLPSPVK
RAFLLAQVDGLSYADIAAQLGISIATVKRHLNKAAMRCYFAL
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgcagtcaaataccattgaaggcctgtatctggaccaccaccgctggctcacggga
tggctgcggcacaagctcggctgcccgcaaggcgccgccgacctggcacaagacacgttc
atgcgattgctcacggcacgggagacgccggacatcgcgcagccacgggcgtttttgacc
acggtcgccaagcgcgtgctgttcaatcattaccgtcgccaagaccttgagcgtgcttat
ctgctggccctggccgagcaaccgcaagcgctggcgcccagtgaagaagagcgcgccatc
atcctgcaaaccctgatggagctggaccaattgctcgacggcctgccgtccccggtcaag
cgtgcctttttactcgcacaagtcgatggcctcagctacgccgacatcgctgcgcaactg
ggcatttcgattgcgaccgtcaaacgtcatttgaacaaagccgccatgcgctgctatttc
gcgctatga
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