Pseudomonas lundensis: AA042_15865
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Entry
AA042_15865 CDS
T05473
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
plq
Pseudomonas lundensis
Pathway
plq03030
DNA replication
plq03430
Mismatch repair
plq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AA042_15865
03430 Mismatch repair
AA042_15865
03440 Homologous recombination
AA042_15865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plq03032
]
AA042_15865
03400 DNA repair and recombination proteins [BR:
plq03400
]
AA042_15865
Enzymes [BR:
plq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AA042_15865
DNA replication proteins [BR:
plq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AA042_15865
DNA repair and recombination proteins [BR:
plq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AA042_15865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AOZ13957
LinkDB
All DBs
Position
3517792..3521313
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLIKTLAGMNMPAVAVTDQNNMCSLVKFYKAAMGGG
IKPISGADLWLSNKDPENPLSRISLLAMNGVGYRNLTELISRGFIDGQRNGQVIIEREWV
AEAAEGLIMLSAAKEGEIGVALISGNTEEAEALAREWMEVFPDRFYLEVQRTQRPNDEEH
LHAAVALADKIGAPLVATNDVRFLKQQDFEAHETRVCIGEGRALDDPRRSKNYSDQQYLK
SAEEMAELFSDLPEALENTVEIAKRCNIEVKLGKHFLPNFPIPDGMTIDEYFRKVSFDGL
EERLSVLLPKDTTEDYDAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKSNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYV
AEKYGRNAVSQIITFGSMAAKAVIRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKVDEEAAEIWEMARKLEGIVRNVGKHAGGVVIAPTKLTDFSPIYCDEEGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVDEPPLDIAFIPLDDKPTYQ
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCANNNIDPDLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNASEYKFTVNDEGRIIYGLGAI
KGVGEGPVEAITEARQDGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPCFHDEP
KAYQASIDQNRAILLAALEEAIKAAEQTARTHDSGHDDLFGGVFVEEDADVYANHRKAKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFAEAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
VKRVMSMEDARTSLAESLRLRVHHAALKGDQLRQLGDVLKKHRGACPITMEYTGGEAKTL
LQFGENWRIDPADSLIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcacctgcgcctgcacactgaatattccctggtcgatggcctg
gtgcggatcaaaccgctgatcaaaaccctggcgggcatgaacatgcctgccgtggcggtg
accgatcagaacaacatgtgttcgttggtcaaattttataaagccgccatgggtggcggc
atcaagccgatcagtggcgcggatctgtggctgtccaataaagacccggaaaacccgttg
agccgcatcagcctgctggcgatgaacggtgtgggttatcgcaacctgacggagctgatt
tcacgagggtttattgacgggcagcgcaatggccaggtcatcatcgagcgtgaatgggtc
gccgaagccgccgaagggttgatcatgttgtcggccgccaaagaaggcgagatcggtgtc
gcgctgatcagtggtaataccgaggaagccgaggcgctggcccgcgaatggatggaggtc
ttcccggaccgcttttacctggaagtccagcgcacccagcgtcccaacgatgaagagcac
ctgcacgctgctgtggcgctggccgacaaaatcggtgcgccgctggtggcgaccaacgat
gtgcgcttcctcaaacagcaggatttcgaagcccacgagacccgcgtttgcattggcgag
ggccgagcgcttgatgatccgcgccgctccaagaactacagcgaccagcagtatctgaaa
agcgccgaagaaatggctgagctgttcagcgatttgccggaagcgctcgaaaataccgtc
gaaattgccaagcgttgcaatatcgaagtgaagttgggcaaacactttttgcctaacttc
ccgattcccgatggcatgaccatcgacgaatatttccgcaaagtctcgtttgatggcctt
gaagagcgcctcagcgttctgctgcccaaggacaccaccgaagattacgacgccaaacgg
caggtctacgtcgaccggctgaatttcgaactggacatcattatccagatgggattcccc
ggttacttcctgatcgtgatggacttcatccagtgggccaagagcaacggcgtgccggta
gggcctggccgagggtcgggtgccggttctctggtggcctatgtgcagaaaattaccgac
ctcgatccgctggaatatgacctgctgttcgaacgattccttaacccggaacgggtatcg
atgcccgacttcgacgtcgacttctgcatggatggtcgtgaccgggtcattgaatatgtg
gcagaaaaatacggccgcaacgctgtaagccagatcattaccttcggttcgatggcggcc
aaggcggttattcgcgacgtggcccgtgtgcagggtaagtcttacggcctggcggatcgt
ttgtcgaagatgattccgtttgaagtcggcatgacgctggaaaaggcctacgagcaggaa
gagatcttgcgcgacttcatcaaagtggatgaagaagccgccgaaatctgggagatggca
cgcaagctcgaaggcatcgtgcgtaacgtcggtaaacacgccggtggtgtggtgattgcg
ccgaccaaactgacggacttttcgccgatctattgcgatgaagagggtgacggcctggtc
acccagttcgacaaggacgacgttgaagccgcagggctggtgaagttcgacttcctcggt
ttgcgcacgctgaccatcattgactgggcgctgaaaaccatcaaccgcgaccgcgccaag
gtcgacgagccgccgctggatattgcgtttatcccgctggatgacaaaccgacctaccag
ttgctgcaaaaagccgagacgacggcggtgttccagcttgagtcgcgaggcatgaaagag
ctgatcaaaaagctcaagcctgactgcctggaagacctgatcgcactggtggccctgttt
cgtccggggccgctgcaatcgggcatggtggacgacttcatcaaccgtaagcacgggcgc
gccgagcttgcttatccgcattcggattatcagtacgaaggcctgaagccggttctggcc
ccgacctacggcatcattctgtatcaggaacaggtgatgcagattgcgcaggtgatggcg
ggttacaccctcggcggcgcggacatgctgcgtcgagccatgggtaagaaaaaacctgaa
gaaatggccaagcagcgtggcggtttcattgaaggctgtgccaacaacaacatcgaccct
gaccttgccggtaacattttcgacctggtagaaaaattcgccggttatggtttcaacaaa
tctcactcggcggcctacgggctggtttcctatcaaaccgcgtggctgaaagcccattac
ccggcgccgttcatggcggccgtgctgtcggcggatatgcacaacaccgacaaggtcgtg
accttgatcgaagaagtgcgcacgatgaagctgcgtctcgacgcgccggacgtgaatgcc
tccgagtacaagttcacggtgaacgacgaaggtcgaatcatttacggacttggcgcgatc
aagggcgtgggtgaggggccggtggaggcgattaccgaagcgcgtcaggatgggccgttc
aaggacctgttcgatttctgcgcgcgggttgatctcaagcgcatcaacaaacgcaccctt
gacggtttgatccgcagcggcgcgctggaccgtctggggccttgcttccatgacgagcca
aaagcctatcaggcgagcattgatcagaaccgtgcgattttgctggcggcgctggaagag
gcaatcaaggcggccgaacaaacggcgcgtacccacgacagcggccacgacgacctgttc
ggcggcgtgtttgtcgaagaagacgccgatgtgtatgccaatcatcgcaaggccaaggag
ctgactctcaaggaacgcctcaagggcgagaaagacaccttgggcctgtacctgaccggc
cacccgatcgacgagtatgaaggcgaaattcgccgtttcgcccggcagcgcattatcgat
ctgaagcctgcccgcgatacgcagactgtcgccggcatgatcatcgccctgcgggtgatg
aagaacaaaaaaggcgacaagatggggttcatcacgctggatgaccgttccggccggatt
gaagcctcattgtttgccgaagcgttccattcagcccagtcgctgttgcagaccgatgcc
atggtggtggtggaaggggaggtcagtaatgatgacttttccggcggcttgcgcctgcgg
gtcaagcgggtcatgagcatggaggatgcgcgtaccagtctggccgaaagcttgcgcctg
agggtccatcacgcggcgctcaagggtgatcagttgcggcaattgggcgacgtgctgaag
aagcatcgcggcgcctgcccgatcaccatggagtacaccggcggggaggcgaagaccctg
ttgcagtttggtgagaactggagaatcgatcctgcagacagcttgattcaagccttgcgt
gaccagtttgggcgagacaacgtcttcctccaataccgttga
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