Pseudomonas lundensis: AA042_17915
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Entry
AA042_17915 CDS
T05473
Name
(GenBank) RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
plq
Pseudomonas lundensis
Brite
KEGG Orthology (KO) [BR:
plq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plq03009
]
AA042_17915
Enzymes [BR:
plq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AA042_17915
Ribosome biogenesis [BR:
plq03009
]
Prokaryotic type
rRNA helicases
AA042_17915
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOZ14317
UniProt:
A0AAP8D915
LinkDB
All DBs
Position
3958657..3960003
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AA seq
448 aa
AA seq
DB search
MFSDFALHERLLKAVAELKFVEPTPVQAAAIPLALEGRDLRVTAQTGSGKTAAFVLPILN
RLIGPAKIRVSIKALILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRK
VPDILIGTPGRLLEQLNAGNLDLKEVEVLVLDEADRMLDMGFSEDVQRLVDECPNRQQTM
LFSATTGGSGLRDMIGKVLTNPEHLQLNQVSQLNATTRQQIITADHNQHKEQIVNWLLAN
ETYQKAIVFTNTRAMADRIYGRLVAQEYKAFVLHGEKDQKDRKLAIDRLKQGGVKILVAT
DVAARGLDVEGLDLVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLICHGDWNLMSSIER
YLKQTFERRTIKEVKGTYGGPKKVKASGKAVGVKKKKTDAKGDKKKSGAKAPTKRKIANR
PKTDALSLVSKDGMAPLKRRKPEAPAAE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgttttccgatttcgccctgcacgaacgcctgcttaaagctgtggccgagcttaaattt
gtcgagcctacgcctgtgcaagcagcggccattccgctcgcgctcgaagggcgtgacctg
cgggtaacagctcagaccgggagtggcaagaccgccgctttcgtcctgccgatcctgaac
cgcctgatcggcccggccaaaatccgcgtcagcatcaaagccctgatcctgctgccgacc
cgcgagctggcacagcaaacgctgaaagaagtggagcgtttttcgcagttcacgttcatc
aaatccggcctgatcaccgggggtgaagacttcaaggttcaggcggccatgttgcgcaag
gtgccggatatcctgatcggtacgccgggtcgtctgctggagcaactgaacgcgggcaat
ctggacctcaaggaagttgaagtgctggtgctcgacgaagccgaccgcatgctcgacatg
gggttctccgaagacgtccagcgtctggtggacgaatgccctaaccgccagcagaccatg
ctgttctcggccaccaccggtggttcgggcctgcgtgacatgattggcaaggtgctgacc
aaccccgagcacttgcagctcaaccaggtcagccagttgaacgccaccacgcgtcagcag
atcatcaccgccgaccacaaccagcataaagagcagatcgttaactggttgctggcgaac
gagacgtatcagaaggccattgttttcaccaatacccgtgccatggccgaccgtatctac
ggccgtctggtggcgcaggagtacaaggcgtttgtcttgcacggtgagaaagaccagaaa
gaccgcaagctggccattgaccgcctcaagcagggcggcgtgaagatcctggtggcgacc
gatgtggcagcccgtggtctggacgttgaaggcctggacctagtgatcaacttcgacatg
ccgcgcagcggcgacgaatacgtgcaccgtatcggccgtaccggccgtgcaggtaacgat
ggcctggcgatctcgctgatctgccacggtgactggaacctgatgtccagcatcgaacgc
tacctgaagcaaacctttgagcgtcgcaccatcaaggaagtcaaaggcacgtacggcgga
ccgaaaaaggttaaggcctcgggcaaagcggtcggcgtgaaaaagaaaaagaccgacgcc
aaaggcgacaagaagaaatcaggcgccaaggcgcctaccaagcgcaagatcgccaatcgc
ccgaagaccgacgccctgtcgctggtcagcaaggacggtatggcgccgctcaagcgtcgc
aagccagaagcgccggcagcggaataa
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