Pseudomonas lundensis: AA042_18175
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Entry
AA042_18175 CDS
T05473
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
plq
Pseudomonas lundensis
Pathway
plq02020
Two-component system
plq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
plq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AA042_18175
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AA042_18175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
plq02022
]
AA042_18175
02035 Bacterial motility proteins [BR:
plq02035
]
AA042_18175
Two-component system [BR:
plq02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
AA042_18175
Bacterial motility proteins [BR:
plq02035
]
Flagellar system
Flagellar assembly proteins
Others
AA042_18175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
MCM
AAA_2
HTH_30
FleQ
AAA
MerR
HTH_20
AAA_19
AAA_3
nSTAND3
HTH_24
HTH_23
HTH_11
Sigma70_r4_2
RsiG
HTH_28
DUF2249
AAA_7
HTH_17
AAA_22
Myosin_head
NPHP3_N
HTH_Mga
ATPase
TIP49
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AOZ15163
UniProt:
A0ABX4GP61
LinkDB
All DBs
Position
4011200..4012603
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AA seq
467 aa
AA seq
DB search
MRINVLLVEDDRALREALSDTLLLAGHRFRAVGSAEEALEAVSAEAFSLVVSDVNMPGMD
GHQLLALLRARQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALLELVARHALG
SVSAADAQGPVAIEPASVQLLELAARVARSDSTVLISGESGTGKEVLARYIHQHSHRATQ
PFVAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTLLLDEISEMPLGLQA
KLLRVLQEREVERVGGRKPIALDIRVVATTNRDLAGEVAAGRFREDLFYRLSVFPLAWRP
LRERTADILPLAERLLAKHINKMKHTAVRFSADAQACLTGYGWPGNVRELDNAIQRALIL
QHGGLIEAADFCLSGPVACAPLSSSSSARLPAPAQTSSELTGESAGALGDDLRRREFQMI
IDTLRAERGRRKEAAERLGISPRTLRYKLAQMRDAGMDVEAYLFATP
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaatgtgctgctggtggaagacgatcgcgcgctgcgtgaagcgttatccgac
actttgctgctggccgggcatcggtttcgcgccgtggggtctgctgaagaagcgctggag
gcggtctcggccgaagcgttcagtctggtggtcagcgacgtcaacatgccgggcatggac
ggtcaccaattgctcgccctgttgcgggcgcggcaaccccaactgccggtgttgttgatg
accgcccacggcgcggtggagcgcgcggtggacgccatgcgtcaaggcgcggcggattac
ctggtcaagccgtttgaacccaaggcgctgctggagctggtggcacgccatgcgctcggc
agtgtgagcgcggctgacgcgcaaggcccggtggccatcgaaccggccagcgtgcaactg
ctggagctggcggcccgcgtggcccgcagcgattccacggtgctgatttcgggcgagtcc
ggcaccggtaaagaagtcctggcgcgttacattcatcagcactcccatcgggcgactcag
ccctttgtcgcgatcaactgtgcggcgattccggacaacatgctggaagcgacgctgttc
ggccacgaaaaaggctcgttcaccggggcgattgcggcgcaggcgggcaagttcgagcag
gcggacggcggcacgctgctgctggacgaaatctcagagatgccgttgggccttcaggcc
aaactgttgcgcgtgttgcaggagcgcgaagtcgagcgggtcggcgggcgcaagccgatt
gccctggatattcgggtcgtggccaccaccaaccgcgacctggcgggcgaagtggcggcg
gggcggttccgggaagatctgttctaccggctgtcggtgtttccgctggcctggcgcccg
ttgcgcgagcgcaccgccgatattctgccgctggcagagcgcctgctggccaagcacatc
aacaaaatgaaacacaccgccgtgcgcttttcagcggatgcgcaagcgtgcctgaccggc
tacggctggccgggcaatgtgcgtgagctggacaacgcgattcagcgcgccctgatcctg
cagcacggcgggctgatcgaagcggcggatttttgtctgtccgggccggtggcctgtgcg
ccgctgtcctcttcaagcagcgccagattgccggcgcctgctcaaacctccagcgaactg
accggggaatcggcgggggccttgggcgatgacctgcgccgtcgcgagttccagatgata
atcgacaccttgcgcgccgagcgcggtcgccgcaaagaggccgccgagcgtttgggcatc
agcccgcgcaccctgcgctacaaattggcgcaaatgcgcgatgccggtatggatgtcgag
gcgtacctgttcgccaccccttga
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