Pseudomonas lundensis: AA042_19630
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Entry
AA042_19630 CDS
T05473
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
plq
Pseudomonas lundensis
Brite
KEGG Orthology (KO) [BR:
plq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plq03400
]
AA042_19630
DNA repair and recombination proteins [BR:
plq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AA042_19630
Archaeal homologous recombinant proteins
AA042_19630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
nSTAND3
AAA_15
NUDIX_5
MMR_HSR1
AAA_22
cobW
UPF0184
Motif
Other DBs
NCBI-ProteinID:
AOZ14608
LinkDB
All DBs
Position
complement(4310393..4314034)
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFELDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNTGRDAKVPDVDGEIATGDPRTLLRRGTGEGYAEVDFLGIDGRRYRARWEANRAREKA
TGKLQASRQSLRDLDSDQLLASQKGDYKVQLEARLGLNFEQFTRAVMLAQSEFSAFLKAD
DNERSELLEKLTDTALYTRLGKRAFDKAKETRDLHKQLQDQAVGITPLSPDARLELDQQF
TLAQQQLRARQGQLKQLEQQHVWLKTLRELQEQHQSAAEQLQQAQGLWDSQAGDRDTLHW
LEQLAPQRHQFARLAELDAQVRPLTAQMAYHQQQHAQLEAQHAQQVHTLEAARLATEQAQ
AMHQQCATPLQQAYAEQANLQRLTDTLDKQRALKQQADTASAAGQQRLDTLIERQQRSTE
QLSLIAQQLEHSAELAPLANAWDAWRPRLQQLVRLSTTLSTGQHELPALEQRALHAAQQL
TEQRNSLEILFQEAAAEPHAVNEQIQALGSLLKDNRQQQRDYEDLQRLSSTQQALDDRLQ
ALQSKLQALQSEREQRIELGTQTKKQYEAAEQALNVTRQLLERQRLARSASVEELREHLQ
DNQPCPVCGSHEHPYHQPEALLQSLSRHDENEEAAARKAVDTLKATLDQLREQVSGLNAQ
LRELRLQHQQLLDDQQALAPSLEAHPHHAQWHDQPAAKRAPWLAHRLEQLHYSISRDEER
QNALLALQRDAAQLQGDIQRSSDASQLAARQLADQQVQLNADAQRLEEELAAFSSLLPAE
RLAELRAHTSACFMALDQQVGERLAHLEQQRDELAEHAARSQTLEREQVQHSHQRSQQDA
LQQALDEWLAQQHASKQALHALLGPHSSAEAWQQHLERALEQARTAQAHASDTVQATTRQ
QIQLTAELKAHRERLQALEQEHATLTAQVAQWRALHTGVDDARLYQLLAHDEPQVRSLRE
RLLGSEKNLEHTRVLLQEREQQLARHQAQANGNLDAEALTQALDALNVQLEVSEQLSAGL
RAQQAEDNRRTEANQALAQRTAQAYNEWQRWARLSDLIGSGTGDKFRKIAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVGVISHVQEMHERIPVQIQV
QRQGNGLSTVQVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcgccatccgcctgaaaaacctcgcttcgctggcgggcccgtttgaactg
gatttcacggccgagcccctggccagcgccggtctattcgccattaccggccccaccggc
gccggtaaaagcaccctgctcgacgccttgtgcctggcgttgtttggcgccgtgccgcgc
ctgaacaacaccggccgcgatgccaaagtgcccgatgttgacggcgagatcgccactggc
gacccgcgcaccctgctgcggcgcggcacgggcgaaggctatgccgaagtggattttctc
ggcatcgacggacgccgctaccgggcgcgctgggaagccaaccgcgcgcgggaaaaggcc
accggcaagctccaggccagccgccagagcctgcgcgatctggacagcgatcaattgctg
gccagccagaaaggtgattacaaggtccagctcgaagcgcggctggggttgaacttcgaa
cagttcacccgcgccgtgatgctggcccaaagcgagttcagcgccttcctcaaggccgac
gacaacgaacgcagcgaactgctggaaaaactcaccgacactgcgctgtacacccgtctg
ggcaaacgcgctttcgacaaggccaaggaaacccgcgacctgcacaagcagctacaggat
caagcggtggggattacgcccctgtcgcctgacgcgcgcctcgaactggatcaacaattc
accctggcccaacaacagctcagggcccgacaaggccagctcaaacagctggagcagcaa
cacgtctggctcaagacgttgcgcgaactgcaagaacaacaccaaagcgccgccgagcag
ttgcagcaggcgcaagggctgtgggacagccaggccggtgaccgcgacaccctgcactgg
ctcgaacaactggccccccagcgccatcagtttgcacggctggccgagctggacgcacag
gtgcgtccactcacggcgcagatggcctaccatcaacagcaacacgcgcagttagaggca
caacacgcgcaacaggtgcacacgctggaagccgcgcggctggcgacagagcaggcccag
gccatgcaccagcagtgcgccacgccactgcagcaggcctatgcagaacaggccaacctg
caacggctcactgacacgctcgacaagcaacgcgccctcaaacagcaagccgacaccgcc
agtgcggcgggccaacaacggctcgacaccctgatcgagcgccaacaacgcagcaccgaa
cagctgtcactgattgcccaacagcttgagcacagcgctgaactggcgccgctggccaat
gcctgggacgcctggcgcccgcgcttgcagcaactggtgcgcttgagcaccaccttaagc
accggtcaacacgagctgccggccctggagcaacgtgccctacacgccgcgcagcaactg
actgaacagcgcaacagcctggaaatcctgtttcaggaagcggcggccgaaccccacgcc
gtcaacgagcaaatccaggcgttgggcagcttgctcaaggacaatcgccagcagcagcgc
gactacgaagacttgcagcggctgagcagcactcaacaggcgctggacgaccggttgcag
gccctgcaaagcaaattgcaggcgctgcaatcagaacgcgaacagcggatcgaactcggc
acccagaccaaaaaacaatacgaggcggccgagcaggcactgaacgtcacccgccaactg
ctggagcgccagcgactggcccgcagcgccagtgttgaagaactgcgcgagcacttgcag
gacaaccagccgtgcccggtctgcggcagccacgaacacccgtaccaccagcccgaagcc
ttgttgcaaagcctttcgcgccatgacgaaaacgaagaggcggcggcccgcaaggccgtg
gacacactcaaggccaccctcgatcaactgcgtgaacaggtcagcggcctgaatgcgcaa
ctgcgcgaactgcgcctgcaacatcagcaattgctggacgaccaacaggcactcgccccc
agcctggaggcgcacccgcaccatgcgcaatggcacgaccaacccgcggccaagcgggcg
ccgtggctggcccatcggcttgaacaattgcactacagcatcagccgtgacgaagaacgt
cagaacgccctgctcgccctgcaaagggacgccgcacaactgcaaggcgacatccagcgc
agcagcgacgccagccagttggccgcccggcaactggccgaccagcaggtgcagctcaac
gccgacgcccagcgcctcgaagaggaactggcggcgttctccagcctgttgcctgccgag
cgcctggccgaactgcgtgcgcacacgtcggcctgtttcatggcgttggatcaacaggtg
ggcgagcggcttgcgcacctggagcaacaacgcgacgaactcgctgagcatgcggcgcgc
agccagaccctcgagcgcgagcaggtgcagcacagccatcagcgctcccagcaggacgcg
ctgcaacaagccctggacgaatggctcgcgcagcaacatgccagcaagcaggccctgcac
gccctgttgggcccacacagcagcgccgaagcctggcagcaacaccttgaacgggccctg
gaacaggcccgcaccgcgcaagcccatgccagcgacaccgtgcaggccaccacccgccag
cagatccagctgacggcggaactcaaggcgcaccgcgaacgtttgcaggcacttgagcag
gagcacgccacgttaacggcgcaggtcgcccaatggcgtgccttgcacactggcgtggat
gacgcgcgcctgtatcaattgttggcccatgacgagccacaggtgcggtcactgcgcgag
cgtctgctgggcagtgaaaaaaacctggaacacacccgggttctgcttcaggaacgcgaa
cagcaactcgcccggcatcaggcacaggccaacggcaatctggacgccgaggccctgacc
caggcccttgacgcgctgaacgttcaactggaggtgagcgaacaattgagcgccggactg
cgcgcgcaacaagctgaagacaatcggcgcaccgaggccaatcaagcactggcgcagcgc
accgcgcaagcctataacgagtggcagcgctgggcgcggctcagtgatttgatcggttcg
ggcaccggggacaaatttcgcaagattgcccaggcttataacctcgacctgctggtccac
cacgctaatgcccaactgcgccaactggtgcgccgctaccgcctcaagcgcggcggcagc
atgcttggattgctggtgatggacacggaaatgggcgacgaactgcgctcggtgcattcg
ttgtcgggcggcgagacctttttggtatcgctggcgctggccctcgggctggcatccatg
gcgtccagcacgctgaaaatcgaatcgctgtttattgacgaaggcttcggcagcctcgac
cccgaatccttgcaattggcgatggacgcgctggacggattgcaggcacagggacgcaag
gtcggggtgatttcccacgtgcaggaaatgcacgaacggattccggtgcagatacaggtt
cagcgccaaggcaacgggctgagcacggtgcaggtcaaatga
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integrated database retrieval system
