Pseudomonas lundensis: AA042_19740
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Entry
AA042_19740 CDS
T05473
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
plq
Pseudomonas lundensis
Brite
KEGG Orthology (KO) [BR:
plq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plq01002
]
AA042_19740
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
plq01011
]
AA042_19740
Peptidases and inhibitors [BR:
plq01002
]
Cysteine peptidases
Family C82
AA042_19740
Peptidoglycan biosynthesis and degradation proteins [BR:
plq01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AA042_19740
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
AOZ14627
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Position
4338210..4339778
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AA seq
522 aa
AA seq
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MIKKHACYLSIALLAAPLVVLADEVPVDPATMIQVALTDLPRECPTLAPRVKPADQQWLQ
AFYQTQQYQPLWSVDGRLAALQTELPTLADDGLDAAHYPLPKEQGVCADIDTSFQYLQAL
QDLHFGRLNPSRFEPVWHSGDEAPDRQAEILAIAGPGLQDIRSAFDKARPALERYQNLRK
VYARERVRPLPHWPVVGQGQLLKPGMQDPRVPVLAERMLSEGYLDHLPKPTNTTYGPELA
AAVKSFQLDHSLQADGVIGPGTLKEMNVSAQARRDQLRINLERFRWMAQDFEPTSLLVNV
PAALLMVYQNGVPVWQTRTQVGRPDRQTPLLKSRVTRLTLNPTWTIPPTIFKQDKLPQIR
RDQSYLARHDLQVLDSSGRQLSPQEVNWERPGNILLRQGAGPRNPLGKIVVRFPNPFAVY
LHDTPSQALFSKAPRAFSSGCVRVESAFELRDWLVNPAEKARTEELLSTGRTHEFRLEQP
MPILMTYWTAQADKDGKITYAPDVYDHDPGLIAALASKSKAD
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
ttgatcaaaaaacacgcatgttacttgagcattgctttgctcgcagcgccattggtcgtt
ctggccgatgaggtgcctgtggaccccgcgacgatgattcaggttgcgctcacagatttg
ccccgcgaatgccccacgctggccccgcgggtcaagcccgccgaccagcaatggctgcag
gcgttttatcaaactcagcagtatcagccgctgtggtcagtggacggccgtctggccgcg
ttgcagaccgaactgcccacgctggccgacgatgggctggacgcggcgcattacccgttg
cctaaagagcagggggtgtgcgctgacatcgacaccagttttcaatacctgcaagccttg
caggacctgcatttcggtcgtctgaacccatcacgtttcgagcctgtatggcactccggc
gatgaagcgccggaccgacaggccgagattctggcgattgccgggccggggttgcaggac
atacgcagcgcgttcgacaaggcgcgccctgcgctggagcgctaccagaacctgcgcaaa
gtctatgcccgcgaacgcgtgcggccgctgcctcactggcctgtagtggggcaggggcaa
ttgctcaaacccggcatgcaggacccgcgggtgcccgtgctggctgagcgcatgctgagc
gagggctatctggatcacctgcccaagcccacaaacacgacctacggcccggaactggcc
gccgccgtgaagagctttcagctggatcattcactgcaagccgatggtgtcatcgggccg
ggtacgctgaaagagatgaacgtcagtgcgcaggcgcgccgggatcaattgcgcattaac
ctggaacgatttcgctggatggcgcaggacttcgaacccaccagcctgctggtcaacgtg
ccggccgcgttgctgatggtttatcaaaatggcgtgccggtctggcaaacccgcacgcag
gtgggcaggccggaccggcaaacaccactgctcaaatcccgcgtcacccgcttgaccctc
aaccccacctggaccatcccgccgaccattttcaagcaagacaaactgccgcaaattcgc
cgcgatcagtcgtacttggcgcgtcatgacctgcaagtgctcgacagcagcggtcggcag
ctttcaccgcaagaggtgaactgggagcgtccgggcaacatcctgctgcgccagggcgca
ggtccgcgcaatccgttgggcaagatcgtggtgcgtttccccaacccgtttgccgtgtat
ttgcacgacaccccaagccaggcgctgttcagcaaagcaccgcgggccttcagttctggg
tgtgtaagggtggagtcggccttcgaactgcgggactggctggtcaatcctgccgaaaaa
gcccgcactgaagaattgctcagcacggggcgcacccatgagttccggctggaacagccg
atgccgatcttgatgacgtactggacggcccaggccgacaaagacggcaagatcacgtat
gcgccggatgtttacgatcacgatcctgggttgatcgcggcactggcgagcaagtcaaaa
gccgactga
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