Pseudomonas lundensis: AA042_20320
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Entry
AA042_20320 CDS
T05473
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
plq
Pseudomonas lundensis
Pathway
plq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
plq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AA042_20320
09124 Replication and repair
03420 Nucleotide excision repair
AA042_20320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plq03021
]
AA042_20320
03036 Chromosome and associated proteins [BR:
plq03036
]
AA042_20320
03400 DNA repair and recombination proteins [BR:
plq03400
]
AA042_20320
Enzymes [BR:
plq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AA042_20320
Transcription machinery [BR:
plq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AA042_20320
Chromosome and associated proteins [BR:
plq03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AA042_20320
DNA repair and recombination proteins [BR:
plq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AA042_20320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AOZ14727
LinkDB
All DBs
Position
4484155..4486407
Genome browser
AA seq
750 aa
AA seq
DB search
MSYRIAVRALCEFTAKIGDLDLRFTPSPSAQQGMAGHRTVASRRSASYQAELSLEGHYRT
LCVRGRADGYDPLNNVLEEVKTFRGDFAALPANHRHLHWAQAKVYGWLLCQQLELPAVNL
ALVYFDIVSEKETRLQEQWSAADLQQFFTRQCEQFLAWAEQEVAHRALRDETARGLAFPH
PVFRTGQRPLAEAVYKTVSTGRCLMAQAPTGIGKTVGTLFPLLKAMPAQQLDKLLFLTAK
TPGRQLALDAAQRLYPAAGPTALRVLELVARDKACEYPQNACNGEACPLANGFYDRLPAA
RQAAVEHSLLDQATLREVALAHQVCPYYLSQEMARWADLVIADYNYYFDFSALLYGLAQA
NQWKVATLIDEAHNLVERARQMYSASLDQYSLNAVRLNAPAPLDKAFKRLNREWNALHKA
QIGPYQVHPQLPGKWLNALTACITAIGDYLNDHPHGMTGELQVFYFEALQFNRVAELFGT
PFIFDVTLRDTGKRRLSQLTLRNVVPAAFIGPRLASAHSNVLFSATLNPRAYYANLLGLA
PDTVWIDVESPFKAEQLSVRVMSHISTRFSHRATSLAPIVELMAEQFEQRAGNYLAFFSS
FDYLQQVAALLAERYPHIPQWQQARRMDETARQGFLDRFTLTGQGIGFAVLGGAFGEGID
LPGARLIGAFIATLGLSQFNPVNEQIKQRMAALFGAGYDYTYLYPGLQKVVQAAGRVIRT
QSDQGAVFLIDDRFAEPNVQQLLPAWWALQ
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
gtgagttatcgcattgcagtcagggccttgtgcgagttcacggccaaaatcggtgacctt
gacctgcgcttcacgccgtcgccgagtgcgcaacaaggtatggccgggcatcgcaccgtg
gcatcccgccgctctgccagctatcaagctgaactgagccttgagggtcattaccgcacg
ctctgtgtacggggcagggccgatggctacgacccgctgaacaacgtgctggaagaggtc
aaaacctttcggggagacttcgcggccctcccggccaatcatcgtcacctgcactgggca
caggccaaggtgtatggctggttgttgtgtcaacaattggagctgcccgcggtcaatctg
gcgctggtgtatttcgacatcgtcagtgaaaaggagacccggctgcaggaacaatggagc
gccgctgacctgcaacagtttttcacccgccaatgtgagcagtttctggcgtgggcggaa
caggaggtggcgcaccgtgcccttcgcgacgagaccgcccgcgggctggcatttccccac
ccggtatttcgcaccgggcaacgcccactggccgaggccgtgtacaaaaccgtcagcacc
ggccgctgcctgatggcccaggcgcccacagggattggtaaaacggtgggcacgctgttc
ccgctgctcaaggccatgcctgcgcaacagctggacaaactgctgttcctcactgccaaa
acccctggccgacagttagcgctggacgcggcgcaacggctgtaccccgccgcaggcccg
acagcgctgcgcgtacttgagctggtggcacgggacaaagcctgcgaatacccgcaaaac
gcctgcaatggcgaggcctgcccattggccaacggtttttatgaccgtttgccggccgcg
cgtcaggccgccgttgagcactcgcttctcgatcaggccacgttgcgcgaagtggccctg
gcgcatcaggtatgcccgtattatttgagccaggaaatggcccgctgggccgatctggtg
atcgccgattacaactattacttcgacttcagtgccttgttgtatggcctggcacaggcc
aaccaatggaaagtcgccaccctgatcgacgaagcccacaacctggtggagcgcgcccgc
cagatgtacagcgcaagcctcgaccagtacagcctgaacgccgtgcgcctgaatgcgccg
gcgcccctcgataaggcattcaagcgcctcaatcgcgagtggaacgcactgcacaaagcg
caaatcggcccgtatcaggttcatccgcaactgccgggcaagtggctgaacgcgttgacg
gcctgcatcaccgcgataggcgattacctcaacgatcacccgcacggcatgaccggcgag
ctgcaggttttttacttcgaggcgctgcaatttaaccgggtggcggagctgttcggcacg
cctttcattttcgacgtcaccctgcgggacaccggcaagcgccgcctgtcacagctcacg
ctgcgcaatgtggtgcccgcggcttttatcggaccgcgcctggccagtgcgcacagtaat
gtgctgttttcagccaccctcaacccccgcgcgtattacgccaatctgctcgggctagcg
ccagacacggtatggatcgacgtcgagtcgccgttcaaggctgaacagctgtcggtgcgc
gtcatgagccacatctctacccgcttcagccaccgggcaacctccctggcgccgattgtc
gagctgatggccgagcagtttgaacagcgggcgggcaactacctggcgttcttcagcagt
tttgactacttgcagcaagtggccgcgctgctggctgaacgctacccgcacatcccccag
tggcaacaggcccggcgcatggatgaaacagcgcgtcaggggtttctcgaccgtttcacc
ctgaccgggcagggcatcggttttgcggtgctgggcggggcatttggagaaggcatcgac
ctgcctggcgcacgcctgattggcgcctttatcgccaccttggggctgagccaattcaac
ccggtcaatgaacagatcaaacagcgcatggccgcgttgttcggagcagggtatgactac
acctatctgtacccgggcttgcaaaaggtcgtgcaggcggccggtcgcgtgatccgcacc
cagagcgatcagggcgcagtgtttttgattgatgaccgttttgccgagcctaacgtgcaa
cagctgttgcccgcgtggtgggcgttgcagtaa
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integrated database retrieval system
