Candidatus Portiera aleyrodidarum BT-QVLC: PAQ_113
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Entry
PAQ_113 CDS
T02306
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
plr
Candidatus Portiera aleyrodidarum BT-QVLC
Brite
KEGG Orthology (KO) [BR:
plr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plr03021
]
PAQ_113 (rpoH)
Transcription machinery [BR:
plr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PAQ_113 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
HTH_10
Fe_dep_repress
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
AFS18843
LinkDB
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Position
121752..122594
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AA seq
280 aa
AA seq
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MIQNYPETNIEGYIKTVLGFPIISAQDEYDLARRLRNKGDLDAARCLVISNLRFVIHIAR
SYSGYGLQNSDIIQEGNVGLMKAVKRFDPAHGVRLVSFAIHWIKAEIHEYVLRNWRIVKI
ATTKSQRKLFFSLRCAKTSLNWLNREEIKSIAKDLNVKPTVVREMECRLSSTDYGFDNKQ
KEEKNNYKNPSNYLEDSRFDPALQFENFDFERYSYRRLYVALNKLDERVRDILKQRWLNE
QKATLHELADIYGVSAERIRQLEQRAIKKIKNYINISTYI
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgatacaaaattatccagaaacgaatatagaaggttatattaaaacagttttaggtttt
cctataatttctgcacaagacgagtatgatttagcaagaaggttaagaaataaaggagat
ttagatgcagctcgttgtttagtaatatctaatttacgatttgttattcatatagctcgt
agttattcaggatatggattacagaattctgatataattcaagaaggcaatgtaggacta
atgaaagcagtaaaacgatttgatcctgctcatggtgttcgtttagtttcatttgctata
cattggataaaagcagaaatacatgaatatgttttaagaaattggagaattgtaaaaata
gctacaacaaaatctcaaaggaaattattttttagtttaagatgtgcaaaaacaagttta
aattggttaaatagagaggaaataaagtcaatagcaaaggacctaaacgtaaagcccacg
gtagtaagagagatggagtgtagattgtcatcaacagattatggatttgataataaacaa
aaagaagaaaagaacaattataaaaatccttctaattatctagaggattcacgatttgat
cctgctcttcagtttgaaaattttgattttgaaagatattcttatagacgtttatatgtt
gctttaaataaacttgatgaacgcgtaagagatattttaaaacaacgttggttgaacgaa
caaaaagcaacattacatgaattagctgatatttatggtgtatcagctgaacggattcgt
caattagaacaacgtgccataaaaaaaataaaaaattatattaacatatcaacttatata
tag
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