Candidatus Portiera aleyrodidarum BT-QVLC: PAQ_140
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Entry
PAQ_140 CDS
T02306
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
plr
Candidatus Portiera aleyrodidarum BT-QVLC
Pathway
plr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PAQ_140 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plr03019
]
PAQ_140 (pnp)
03016 Transfer RNA biogenesis [BR:
plr03016
]
PAQ_140 (pnp)
Enzymes [BR:
plr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PAQ_140 (pnp)
Messenger RNA biogenesis [BR:
plr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PAQ_140 (pnp)
Transfer RNA biogenesis [BR:
plr03016
]
Prokaryotic type
tRNA degradation factors
PAQ_140 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
KH_2
PNPase
Motif
Other DBs
NCBI-ProteinID:
AFS18865
LinkDB
All DBs
Position
155742..157871
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AA seq
709 aa
AA seq
DB search
MSSFVKKQFKYGGKTICLETGKIAKNTKGSVVITIDKTIVLCTVVVNKVLKNKQCLPLSV
FYQEKYYAAGKIPGGFFKREGRATEKEILTSRLIDRPIRPNINNFYNNEIQIICTVLSAK
KNTDITAMIGTYAALGITDIPLKQSMGVARVGFNKEVGFWLDITKEKCSELDIVVAGTKK
SVLMVETEAKQKTEAIIIGAISFAHRELQVVIKNIKEFSKDYKTKNINNKFKSNKLKVHI
SSFKDYLFKKFNHSINDTFYIVDKIKRKEALIIITNQVFETFINHFLTLFYIYENLNLII
KKIFINFLFSIKKRIDGRDFKTIRSLSIELCCLPCTHGSALFCRGDTQAIVALTLGSLRD
AQFIEGLEEDRYDNIMFHYNFTPYSVCEIGFIGMPKRREIGHGNLAKRAILGVVSKDEFP
YSIRIVSEITESNGSSSMASVCGASLALMHAGVPLRTTVAGVSMGLITKKEHFFVLTDIV
DEEDKFGDMDLKIAATFKGITALQMDIKQQGSKTDQKEILQRTLNQALEAIKQISAKMNV
VISQSRKSISINAPSYVVLKIETEKLRDVIGKGGTTIKKICEFTNSAIEIQDDGNIHIYA
KTKLNLQKAIEAIKLITEETKLNKLYRGKVIRIMEFGAFINLLPGIDGLVHVSQISSCHV
TNIREFISEGDIVTVKVLEKDHKGKLKLSIKEIDPIEKSIFEAKIQSFI
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
ttgagttcatttgtaaaaaaacagtttaagtatggtggaaaaactatttgtttagaaact
ggtaaaatagctaaaaacactaaaggtagtgtagttataacaattgacaaaacaatagtg
ttgtgtacagtagttgtaaacaaagttttaaaaaacaaacagtgtcttcctttgtctgta
ttttatcaagaaaaatattatgctgcaggtaaaattccaggtggcttttttaaaagagaa
ggccgcgctacagaaaaagaaatattaacatcaagactaattgatagacctataagacca
aatataaacaacttttataataatgaaatacaaataatttgtaccgtgctttctgctaaa
aaaaatacagatattaccgctatgattggtacatatgcagctctaggtattactgatata
cctttaaaacaaagtatgggtgttgctagagtaggttttaataaagaggttggtttttgg
cttgatataactaaagaaaaatgttcagaactagatatagtcgtagccggcacaaaaaaa
tccgtattgatggtagaaacggaagcaaaacaaaaaacagaggcaataattataggtgct
attagttttgcacatcgagaattgcaagtcgttataaaaaatataaaggaatttagtaaa
gattataaaactaaaaacattaataacaaatttaaatcaaataaactaaaagttcatata
tcttcttttaaagattacttatttaaaaaatttaatcatagtattaatgatactttttat
atagttgataaaatcaaaagaaaagaggcattgataattataactaaccaagtgtttgaa
acatttataaatcactttttaacacttttttatatttatgaaaatttgaacttaataatt
aaaaaaatctttataaactttttgttttccataaaaaaaagaattgatggtcgtgatttt
aaaaccattcgttcattatccattgaattatgttgtttaccttgtactcatggctctgct
ttgttttgcaggggtgatactcaagccatagttgctctaactctgggaagtttacgtgat
gctcaatttattgaaggattagaagaagaccgttatgataatataatgtttcattataat
tttaccccttatagtgtctgtgaaataggttttataggtatgccaaaacggcgtgaaatt
ggccatggtaatcttgcaaaaagagcaatacttggtgttgtatctaaagacgagtttcca
tactcaataagaattgtttcagaaattactgaatcaaatggctctagttctatggcgtct
gtatgtggtgcttcattagcattgatgcatgcaggagtaccattaagaacaacagtagca
ggtgtttctatgggtttgataacaaaaaaagaacactttttcgtacttacagatattgta
gatgaggaagataaatttggtgatatggatctaaaaattgctgctacatttaaaggtata
acagccttacaaatggatataaagcaacaaggcagtaaaacggatcagaaagagatttta
caaaggactttgaatcaagctttagaggctataaaacagattagtgcgaaaatgaatgta
gtaataagtcaaagtagaaaaagtatatctataaacgcacctagttatgttgtattaaaa
atagaaacagaaaaattacgtgatgtaattggtaaaggtggtactactataaaaaaaata
tgtgagtttaccaattctgctatagaaattcaagatgatggcaatatacatatttatgcc
aagactaaattaaatttacaaaaggcaatagaagctataaagttgattactgaagaaaca
aaactaaacaagttatatagaggtaaagttatacgcatcatggaatttggtgcttttatt
aatttattgcctggtattgatggtttagttcatgtttcacaaattagttcttgtcatgtt
acaaatataagagaatttattagtgaaggagatattgtgacggtaaaagtgttagaaaaa
gatcataaaggaaaacttaaattatccataaaagaaatagatcctattgaaaaatcaata
tttgaagctaaaatacaatcatttatataa
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