Candidatus Portiera aleyrodidarum BT-QVLC: PAQ_238
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Entry
PAQ_238 CDS
T02306
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
plr
Candidatus Portiera aleyrodidarum BT-QVLC
Pathway
plr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PAQ_238 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plr03019
]
PAQ_238 (groEL)
03110 Chaperones and folding catalysts [BR:
plr03110
]
PAQ_238 (groEL)
03029 Mitochondrial biogenesis [BR:
plr03029
]
PAQ_238 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plr04147
]
PAQ_238 (groEL)
Enzymes [BR:
plr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PAQ_238 (groEL)
Messenger RNA biogenesis [BR:
plr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PAQ_238 (groEL)
Chaperones and folding catalysts [BR:
plr03110
]
Heat shock proteins
HSP60 / Chaperonin
PAQ_238 (groEL)
Mitochondrial biogenesis [BR:
plr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PAQ_238 (groEL)
Exosome [BR:
plr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PAQ_238 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
PAQ_238 (groEL)
Exosomal proteins of breast cancer cells
PAQ_238 (groEL)
Exosomal proteins of colorectal cancer cells
PAQ_238 (groEL)
Exosomal proteins of bladder cancer cells
PAQ_238 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DOCK_N
Phage_GP20
DHC_N2
Motif
Other DBs
NCBI-ProteinID:
AFS18945
LinkDB
All DBs
Position
complement(300324..301955)
Genome browser
AA seq
543 aa
AA seq
DB search
MAAKQIRFSEDARTRMVRGVNALADAVKTTLGPKGRNVVLEKSFGAPTITKDGVSVAKEI
ELKDKFENMGAQMVKEVASKTADVAGDGTTTATVLAQAIVNEGIKQINSGRSPMDLKRGI
DKAILASVEEIKKLSVKCTDSRSIAQVGTISANGDSNIGQLIAKSMEKVGKKGVITVDES
RGFEDELEVVEGMQFDRGYISPYFVTNQENMTVELESPYILIVDKKISNIRELLHLLENV
AKSGKPLMIIAEDIEGDALATLVVNNMRGIVKVAAAKAPGFGDRRKAMLQDLAILTGSTV
ISDEIGLNIEKVTIKNLGNARRITMSKENTTIIDGAGSERDIESRVKQIRKQIEETTSDY
DKEKLQERVAKLSGGVAVIKVGAATEIEMKEKKARVEDALHSTRAAVEEGVVAGGGTALI
RILNKLQNLKGNNEDQTHGIKIALKAFEAPLRQIVNNAGEEASVIINKVKEGVGNYGYNV
STGEFGDLINMGVLDPAKVTRTVLQSAGSIGGMIITTEAMIADHQDENNKMPHSTDGVNG
MRS
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaacagattagattttctgaagatgcgcgaacacgtatggtacgaggtgta
aatgcactagcagatgcagttaaaacaactttaggtccaaaaggtcgtaatgtggtttta
gaaaaatcatttggtgcccctacaataacaaaagatggagtttctgtagcgaaagaaata
gaactaaaagataaatttgaaaacatgggtgctcaaatggtaaaagaggtagcttcaaaa
acagcagatgtagcaggagatggaactacaacagctaccgtattagcacaagcgatagtt
aatgaaggaattaaacaaataaattcaggaagaagtcctatggatttaaaaagaggtata
gataaagctatattagcttcggtagaagagatcaagaaactttctgtaaaatgtacagat
tcaagatcaatagctcaagtaggtacaatttcagctaatggcgacagcaatattggtcaa
ttaatagcaaaatcaatggaaaaagttggtaaaaaaggtgtaataacagtcgatgaaagt
cgaggttttgaagacgagctagaagttgtagaagggatgcaatttgatagaggttatatt
tcaccttattttgtaacaaatcaagagaatatgactgtagagttagaatcaccgtatata
cttatagtagataaaaaaatatcaaatattcgtgaactattacacttgttagaaaacgta
gctaaatctggaaaaccattgatgattatagcggaagacattgaaggtgatgcattagca
acattagttgttaacaatatgagaggcatagtaaaggtagcggcagctaaagcaccaggt
tttggtgatcggcgtaaagcaatgttgcaagatttagcaatactaacaggtagtactgtg
atttcggatgaaatagggctgaatatagaaaaagtaacaataaagaatttaggcaatgct
cgtagaatcacgatgtcaaaagaaaatacgacgatcatagatggtgcaggttcagaaaga
gatattgaatcaagagtgaaacaaatcagaaaacaaatagaagaaacaacatcagattat
gataaagaaaaacttcaagaaagagtagctaaattatctggtggagtagctgttataaaa
gtaggtgcagcaactgaaatagaaatgaaagaaaagaaagctagagtagaagatgcttta
cattcgactcgcgctgctgttgaagaaggtgttgtagctggaggaggtactgctttaatc
agaattttaaataaattgcaaaatttaaaaggcaacaacgaagaccaaacacatggaata
aaaatagctcttaaagcgtttgaagctcctttaagacaaattgtaaataacgcaggtgaa
gaagcatcagttataataaataaggtaaaagaaggtgttggtaattatggatataatgtt
agtactggggagtttggtgatttaattaatatgggtgttttagatccagctaaagttact
agaacagttttacaatcagctggttcaataggtggaatgattatcacaactgaagcaatg
atagcagatcatcaggacgagaataacaaaatgcctcatagtactgatggggtaaatggt
atgagatcttag
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