Planctomyces sp. SH-PL14: VT03_00200
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Entry
VT03_00200 CDS
T04354
Symbol
frdA
Name
(GenBank) Fumarate reductase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls00020
Citrate cycle (TCA cycle)
pls00190
Oxidative phosphorylation
pls00650
Butanoate metabolism
pls00720
Other carbon fixation pathways
pls01100
Metabolic pathways
pls01110
Biosynthesis of secondary metabolites
pls01120
Microbial metabolism in diverse environments
pls01200
Carbon metabolism
Module
pls_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pls_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pls_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VT03_00200 (frdA)
00650 Butanoate metabolism
VT03_00200 (frdA)
09102 Energy metabolism
00190 Oxidative phosphorylation
VT03_00200 (frdA)
00720 Other carbon fixation pathways
VT03_00200 (frdA)
Enzymes [BR:
pls01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
VT03_00200 (frdA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
GIDA
Pyr_redox_2
NAD_binding_8
HI0933_like
AlaDh_PNT_C
Thi4
FAD_oxidored
Pyr_redox
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AMV16277
UniProt:
A0A142WNF3
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All DBs
Position
complement(46654..48573)
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AA seq
639 aa
AA seq
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MSTVLNSRVPSGPIEQKWDRCKREMKLVAPNNKRKYDIIVVGTGLAGASAAASLAEMGYN
VKAFCFQDSPRRAHSIAAQGGINAAKNYRNDGDSIWRLFYDTLKGGEWRAREGNVYRLAQ
VSANIIDQCVAAGVPFAREYGGTLANRTFGGALVSRTFYARGQTGQQLLLGAYSGLMRQV
GLGKVKMYSRREMLDLVVVEGHARGIVCRNLENGQFETHSAHAVLLCTGGYGNVFYLSTN
AKGCNVTAAWRAHKRGAFFSNPCYTQIHPTCIPVTGDHQSKLTLMSESLRNDGRVWVPKT
AGDSRPANQIPEEDRDYYLERRYPTYGNMVPRDIASRAAKERCDAGFGVGETKLAVYLDF
GRAIKEQGVDAIRGKYGNLFDMYDKITDEDPYKNPMRIYPAVHYTMGGLWVDYNLESTIP
GLFVLGEANFSDHGANRLGASALMQGLADGYFVAPYTVGHHLASRKLSPITDAHPRFRET
LEEAQGRVNRLLSVNGSETVTSFHRRLGLIMWENCGMARNAAGLTKAIDKIRQLREEFWG
NVRVLGTGDSLNQSLEHAGRVADFLEFGELMCRDALHRQESCGGHFREEYQTEEGEARRD
DANFSYVSAWEHKGDNAPQELHKEALSFEFVPPEVRNYK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgttctcaactcgcgagttccgagcggccccatcgaacagaagtgggaccgc
tgcaagcgcgagatgaagctcgtcgccccgaacaacaagcggaagtacgacattatcgtc
gtcgggaccggtctggccggcgccagcgccgccgcgtccctcgccgagatgggctacaac
gtcaaggcgttctgcttccaggactctccccgtcgcgcgcacagcatcgccgcccaagga
gggatcaacgccgccaagaactaccgcaacgacggcgactccatctggcggctgttctac
gacaccctcaaagggggcgagtggcgggcccgcgaagggaacgtctaccggctggcccag
gtcagcgcgaacatcatcgaccagtgcgtcgccgccggagtcccgttcgcccgcgagtat
ggcgggacgctcgccaaccggacgttcggcggagcgctcgtctcgcgaaccttctatgcc
cgcggccagaccggccagcagctcctgctgggagcctacagcggcctgatgcggcaggtc
ggcctcggcaaagtgaagatgtactcccggcgggagatgctcgacctcgtggtggtcgaa
gggcatgcccgcgggatcgtctgccggaacctggagaacggccagttcgagacgcattcg
gcccacgccgtcctcctctgcaccggcggctacggcaacgtcttctacctctcgacgaac
gccaagggctgcaacgtcaccgccgcctggcgggctcacaagcggggggcgttcttcagc
aacccgtgctacacgcagattcacccgacctgcattccggtcaccggcgaccaccagtcg
aagctcacgctgatgagcgagagcctccggaacgacggccgggtctgggtgccgaaaacc
gcgggcgactcgcggccggcgaaccagattcccgaagaagaccgcgactactacctcgaa
cgccgctatccgacgtacggcaacatggtcccccgcgatatcgccagtcgcgcggcgaag
gagcggtgcgacgccggcttcggcgtcggcgagacgaagctggcggtctacctcgacttc
ggccgggcgatcaaggaacagggtgtcgacgccatccgtggcaagtacggcaacctgttc
gacatgtacgacaagatcacggacgaagacccgtacaagaacccgatgcggatctacccc
gccgtccactacacgatgggcgggctgtgggtcgactacaacctggagagcacgatcccg
gggctgtttgtcctcggcgaggcgaacttctccgatcacggcgccaaccgcttgggcgcc
agcgccctgatgcaggggctcgccgacggatacttcgtcgccccttacacggtcggtcac
cacctcgcctcccgcaagctctcgccgatcacggatgcccatccgcgattccgcgagacg
ctcgaagaagcccagggacgcgtcaaccgcctgctgagcgtcaacggctccgaaacggtc
acgagcttccaccgccggctcggcctcatcatgtgggaaaactgcgggatggcccgtaac
gccgccgggctgacgaaggcgatcgacaagatccgtcagctccgcgaggagttctggggg
aacgtccgcgtcctcgggacgggcgactcgctcaaccagagcctggagcacgccggccgc
gtggcggacttcctcgagttcggcgagctgatgtgccgcgacgctctccaccgccaggag
tcgtgcggcggccacttccgcgaggagtaccagacggaagagggtgaagcgcggcgtgac
gatgcgaacttcagctacgtctccgcctgggaacacaagggggacaacgccccgcaggag
ctccacaaggaagccctgtctttcgagttcgtcccgccggaagtccgcaattacaagtaa
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