Planctomyces sp. SH-PL14: VT03_00460
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Entry
VT03_00460 CDS
T04354
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pls
Planctomyces sp. SH-PL14
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pls03016
]
VT03_00460 (truA)
Enzymes [BR:
pls01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
VT03_00460 (truA)
Transfer RNA biogenesis [BR:
pls03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VT03_00460 (truA)
Prokaryotic type
VT03_00460 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AMV16327
UniProt:
A0A142WNK2
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All DBs
Position
119013..119870
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AA seq
285 aa
AA seq
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MTNLRLTLSYDGTDFAGWQVQPNQRTVQDEVEKGIENLTGERVRVMCAGRTDAGVHALSQ
VINFRTTSSIPPEKWRPALQTRLPPDIVIRSAEGVPDDFHATYSAKSKRYRYLILNSRVD
DPFLRRFAWRLGYRLNVSDMHRAAQVLVGTHDFRSFESNWPNKASSVRSVYDVAVRRIRQ
HDLFLPKALLTPGGAEEAPDEPLVCVEIEANGFLYNMVRSIVGTLVNIGRGTWPVESMKR
ILESMHRLHAGDTSPAQGLFMATANYDRDMGGEPGVPDEGDGTEE
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaccttcgtcttacactctcctacgacggaaccgacttcgcgggatggcaggtg
cagcccaatcagcggacggtccaggacgaggtcgaaaagggaatcgaaaacctgaccggg
gagcgggtccgcgtgatgtgcgccgggcggaccgacgccggcgtccacgccctctcgcaa
gtgatcaacttccggacaacgtcgtcgattccgcccgaaaagtggcgccccgcgcttcag
acgcggcttcccccggacatcgtgatccgcagcgccgaaggggtccccgacgacttccac
gcgacgtattccgccaagagcaagcggtatcgctacctgattctcaacagccgcgtcgac
gatccctttctgcggcgattcgcctggcggctcggctaccggctcaacgtttccgacatg
caccgggcggcgcaggtcctggtcggaacgcatgacttccgcagtttcgaatcgaactgg
cccaacaaggcgtccagcgtccgttcggtctacgacgtcgccgtccgtcggatccggcag
catgaccttttcctgccgaaggccctgttgacgcccgggggagcggaggaggcgccggat
gagccgctggtttgcgtggagatcgaggccaacggctttctctacaacatggtccggtcg
atcgtcgggacgctggtcaacatcggccgcgggacttggcccgtcgagtcgatgaagcgg
atcctggagtcaatgcaccgcctgcacgccggggacacgtcgccggcccaggggctgttt
atggcgacggccaattacgaccgcgacatgggaggggaaccgggcgtcccggacgaaggg
gacgggacggaggagtaa
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