Planctomyces sp. SH-PL14: VT03_00670
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Entry
VT03_00670 CDS
T04354
Symbol
lysA_1
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls00300
Lysine biosynthesis
pls00470
D-Amino acid metabolism
pls01100
Metabolic pathways
pls01110
Biosynthesis of secondary metabolites
pls01120
Microbial metabolism in diverse environments
pls01230
Biosynthesis of amino acids
Module
pls_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VT03_00670 (lysA_1)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VT03_00670 (lysA_1)
Enzymes [BR:
pls01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
VT03_00670 (lysA_1)
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AMV16369
UniProt:
A0A142WNJ8
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Position
complement(176546..177820)
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AA seq
424 aa
AA seq
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MDAFQYKGGELWCEDVRISELAAEFGTPLFVYSQAKLLHEFRAIKEAFAETDPVLCYSVK
ANSNLSLLKLLNSEGSSFDVVSGGELYRVKHAGADTTRVVFAGVGKTDEEIRFGLESNIL
MFNVESEAELDAIAAVAKSMDRIAPVALRLNPDIDAKTHAKTTTGKKGNKFGMDIERHNQ
LADKVLANPHLELRGIHMHLGSPILTTDPYEAAAKKALEVVTELRSKGHRTNWINLGGGF
GLSYRGQEAPPASRYAEVILPYIRKAECRLALEPGRSICGNAAVLVSNVIYTKREGGKLF
VIQDAAMNDLVRPAMYDSFHRIWPVAPRVAPPVDFEAEVQGCEPADVVGPICESGDYLAK
ARWLPEVKRGELLSTFSAGAYGMAMSSNYNSRPRAAEVLVNGSQVRLIRKRETYEDLIAF
ERGL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggatgcttttcagtacaagggcggcgaactctggtgtgaggacgtccggatctccgag
ctcgccgccgagttcgggacgccgctgttcgtctactcgcaggccaagctcctccacgag
ttccgcgccatcaaggaagcgttcgccgagacggaccccgtcctctgctattcggtcaag
gcgaactccaacctctcgctcctgaagctcctcaactccgagggaagcagcttcgacgtc
gtctcggggggtgagctctaccgggtcaagcacgccggggcggacacgacgcgggtcgtt
ttcgccggcgtcggcaagaccgatgaggaaatccgcttcggcctcgaatcgaacatcctc
atgttcaacgtcgagagcgaagcggaactcgacgccatcgccgccgtggcgaagtcgatg
gaccgcatcgcccccgtcgcgcttcgcctcaacccggacatcgacgccaagacccacgcc
aagacgacgaccggcaagaaggggaacaagttcgggatggacatcgagcggcacaaccag
ctcgccgacaaggtcctcgcgaacccgcacctcgagctccgtggcatccacatgcacctg
ggctcgccgatcctgacgaccgatccctacgaggcggccgccaagaaggccctcgaagtc
gtgaccgaactccggtcgaaggggcaccgcacgaactggatcaacctcggcggaggcttc
ggcctcagctaccgcggccaggaagcgcctcccgccagccgttacgccgaagtcatcctg
ccgtacatccgaaaggccgaatgccgcctcgcgctggagccgggccggtcgatctgcggc
aacgcggcggtcctcgtcagcaacgtcatctacacgaagcgcgaagggggaaagctgttc
gtcatccaggacgcggcgatgaacgacctcgtccgccccgcgatgtacgactccttccac
cgcatctggccggtcgccccgcgggtcgccccgccggtcgacttcgaggccgaagttcag
ggctgcgaaccggcggacgtcgtcggcccgatctgcgagtcgggggactacctcgcgaag
gcccgctggctgccggaagtgaagcggggcgagctcctcagcacgttcagtgcgggggct
tacgggatggcgatgagcagcaactacaactcccgcccccgcgcggcggaagtcctcgtg
aacggctcccaggtccggttgatccgcaagcgggaaacgtacgaagacctgatcgccttc
gagcgcggcctgtaa
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