Planctomyces sp. SH-PL14: VT03_01930
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Entry
VT03_01930 CDS
T04354
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
pls
Planctomyces sp. SH-PL14
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pls03021
]
VT03_01930 (rpoS)
Transcription machinery [BR:
pls03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VT03_01930 (rpoS)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AMV16618
UniProt:
A0A142WPA2
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All DBs
Position
442005..442748
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AA seq
247 aa
AA seq
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MEFDATTDRMIRQPQVSLEEQFRLGAECQAWQSRIARLQERAKGESPSRYLPAAIAIAKR
RGAVSRNAIVLSVMRWIAKRAKECRRNPHGMTFEELVSVGALGAMRAAEKWDPSRGIHFL
TFADYSIRRLMYRHGGYGKSRKLRLEDTSLSTDVLADIAADRGPNHMATFHDGAALQEDM
ALVHRLLPKLTAKQQEVIRLRYLCGQWRTFHDVADDLQTTPKAVQDLERHGLAKLAENIR
WETSGRP
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgacgctacgaccgatcgcatgatccggcaaccgcaggttagcctcgaggag
cagtttcggctcggtgccgagtgtcaggcgtggcaatcgaggattgcgcgccttcaggag
cgggcgaagggcgagtcacccagccgatacctcccggcggccatcgccatcgcaaagcgt
cgcggggctgtttcgcggaacgctatcgtcctttccgtcatgcgatggatcgccaagcgg
gccaaggagtgccgcagaaacccgcacggcatgaccttcgaggagctggtatccgtcggg
gctctgggcgccatgcgagccgcggagaagtgggacccctccagggggattcacttcctg
accttcgccgattattcgatccggcgactgatgtatcgccacggcgggtacgggaagtca
cggaagctgcggcttgaggacacgagtctcagtacggacgtcctcgcggacatcgccgct
gaccggggcccgaatcatatggccacctttcatgatggagcagcgctccaggaggacatg
gcgctggtccaccggcttctcccgaagctcacagcgaagcagcaggaggtcatccgcctt
cggtacctctgcggacaatggcggacattccacgacgtggcggacgacctccagacgacc
ccgaaggctgtgcaggatctcgagaggcacgggctcgcgaagttggcggagaacattcgc
tgggagacatccggccgcccctga
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