Planctomyces sp. SH-PL14: VT03_01970
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Entry
VT03_01970 CDS
T04354
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls03420
Nucleotide excision repair
pls03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VT03_01970 (pcrA_2)
03430 Mismatch repair
VT03_01970 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pls03400
]
VT03_01970 (pcrA_2)
Enzymes [BR:
pls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VT03_01970 (pcrA_2)
DNA repair and recombination proteins [BR:
pls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VT03_01970 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
VT03_01970 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_16
SAM_2
Motif
Other DBs
NCBI-ProteinID:
AMV16626
UniProt:
A0A142WPP3
LinkDB
All DBs
Position
complement(450567..452549)
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AA seq
660 aa
AA seq
DB search
MPLDLSLLNAAQRDAVQTLGGPVLVLAGAGTGKTRVITYRIARLVESGVPADRILSVTFT
NKAAKEMLERTRHVLGGNLRKRPWISTFHALCIDILRKDITNLGYPKQFAILDRGDQEAI
ARQVMRDIRVTEKQMKPGDLISCIGRWKSSGIVPAKAGDAARDDKEFLGSIGYRKYQDRL
RSTGSVDFDDILLLTGKLFEEFPDVLDRHQHRFSHVQIDEYQDTNGIQFELVEALVRKHK
NLLVVGDDDQSIYGFRGAEVKHILSFGRHFPGAKIIRLEENYRCTDKILELANNLVAHNR
DRHKKVLRANKPAKLDVRFMEYPDEQTEAEMVVRELKFYTHHKEIPQKDFAILFRTNEQP
RLFEAELRRVGLRYVLVGSQSFFDRKETKDLLAYLKVLSRPRDEQSLLRIINTPVRGIGD
ATVEKIMTRAVKSGRGFWEVIPEAVAEGDVNPRTQKALEEFHTLLEDYRQRFDERPRQMD
AHLRDLINDIGYEAEIEKQYKDPNMQMARATVIDDLVSQLTQFVARGGDPHLNEFISSLA
LDGIQEEPDKEKQANEDAIKMMTLHSAKGLEFPRVYMVGMEEGILPHKRSVEGAESDIAE
ERRLCYVGITRAQEQLTLTRCAGRKKWGKVHKAIPSRFLFEMKRNVNDLTERVEAETVEY
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcgatctcagcctgctcaatgccgcccagcgggacgccgtccagaccctcgga
ggtccggtcctggtcctggcgggagcgggaaccggcaagacgcgggtcatcacctaccgc
atcgcgcggctcgtcgaatccggcgttccggcggaccgcatcctctcggtcaccttcacg
aacaaggcggccaaggagatgctggagcggacccgccacgtcctcggcgggaacctccgc
aagcggccgtggatctcgacgttccacgccctgtgtatcgacatcctgcggaaggacatc
acgaacctcggctacccgaagcagttcgcgattctcgaccgcggagaccaggaggcgatc
gcccggcaggtgatgcgggacatccgcgtcaccgagaagcagatgaagccgggggacctc
atctcctgcatcggccgctggaagtcctccggaatcgtccccgccaaagccggcgatgcc
gcccgcgacgacaaagagttcctcggctcgatcggctaccgcaagtaccaggaccggctg
cggtccaccggctcggtcgacttcgacgacatcctgctccttacgggcaagctgttcgag
gagtttccggacgtcctcgaccgtcaccagcaccgcttcagccacgtccagatcgacgag
tatcaggacacgaacggcatccagttcgagctcgtggaggccctcgtccgcaagcacaag
aacctgctcgtggtgggggacgacgaccagtcgatctacggcttccgcggggccgaggtc
aagcacatcctgagcttcggccggcacttccccggggcgaagatcatccgcctcgaagag
aactaccgctgcaccgacaagatcctcgagctcgccaacaacctggtcgcccacaaccgg
gaccggcacaagaaggtgctgcgggccaacaaaccggccaagctcgatgtgcggttcatg
gagtacccggacgagcagactgaagcggagatggtggtccgtgaactcaagttctacacg
caccacaaggagatcccgcagaaggatttcgcgatcctgttccggacgaacgagcagccg
cgcctgttcgaagcggagttgcggcgggtgggcctgcggtacgtcctcgtcggaagccag
tcgttcttcgaccgcaaggagacgaaggacctcctcgcctacctgaaagtcctctccagg
ccgcgggacgagcagtcgctgttgcggatcatcaatacgcccgtccgcgggatcggcgac
gcgacggtcgagaagatcatgacccgggccgtgaagagcggccgcggcttctgggaggtg
atccccgaggcggtcgcggaaggcgacgtgaacccccggacgcagaaggcgctcgaggag
ttccacaccctcctcgaagactaccgccaacggttcgacgagcggccgcggcagatggat
gcccacctgcgggacctgatcaacgacatcggctacgaggcggagatcgagaagcagtac
aaagaccccaacatgcagatggcgcgggcgacggtcatcgacgatctcgtcagccagctc
acgcagttcgtggcccgcgggggggatccgcacctcaacgaattcatctcgagcctcgct
ctcgacgggattcaggaggagccggacaaggagaagcaggcgaacgaagacgccatcaag
atgatgaccctccacagcgccaaggggctggagttcccgcgggtctacatggtcgggatg
gaggaggggatcctgccgcacaagcggtcggttgagggggcggagtccgatatcgccgaa
gagcggcggctatgctacgttgggatcacgcgggctcaggagcagctgacgctgacccgg
tgtgccggccgcaagaagtggggcaaggtccacaaggcgatcccgtcccgcttcctcttt
gagatgaagcggaacgtgaacgatctcaccgagcgggtcgaagcggagacggtcgagtac
tga
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